HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:34.0 nTPM
HPA Brain:72.4 nTPM
GTEx:34.0 nTPM
FANTOM5:84.2 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:20.2 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020387
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.4
Sample id Sample description nTPM
Hippocampus
nTPM: 64.3
2621 Female, age 67, right hemisphere 79.2
2148 Female, age 91, left hemisphere 72.3
2529 Female, age 94, left hemisphere 71.1
1855 Male, age 76, left hemisphere 60.3
1911 Female, age 85, right hemisphere 53.7
1898 Male, age 80, left hemisphere 49.1
Dentate gyrus
nTPM: 62.7
2531 Female, age 67, both hemispheres 86.6
2246 Female, age 85, both hemispheres 67.3
2530 Female, age 94, left hemisphere 63.0
1927 Female, age 91, both hemispheres 55.1
2010 Male, age 76, both hemispheres 52.8
2528 Male, age 74, both hemispheres 51.4
Entorhinal gyrus
nTPM: 72.4
2686 Male, age 75, right hemisphere 81.9
2613 Female, age 94, left hemisphere 80.8
2764 Male, age 80, right hemisphere 73.1
1787 Male, age 76, left hemisphere 71.9
1938 Female, age 85, left hemisphere 65.9
2117 Female, age 91, right hemisphere 60.5
Hippocampus, CA1
nTPM: 57.1
2045 Male, age 76, both hemispheres 68.1
2527 Male, age 74, both hemispheres 61.5
2082 Female, age 91, right hemisphere 53.8
1873 Female, age 85, both hemispheres 51.0
2749 Male, age 80, left hemisphere 51.0
Hippocampus, CA2
nTPM: 55.9
2437 Female, age 94, left hemisphere 66.5
1940 Female, age 85, left hemisphere 64.4
2113 Female, age 91, right hemisphere 60.8
1892 Male, age 76, both hemispheres 55.3
1963 Male, age 80, left hemisphere 45.9
2249 Male, age 74, both hemispheres 42.6
Hippocampus, CA3
nTPM: 64.4
2861 Female, age 67, both hemispheres 87.9
2620 Female, age 94, left hemisphere 83.4
1867 Male, age 76, both hemispheres 57.3
1891 Female, age 85, both hemispheres 54.2
2137 Male, age 80, left hemisphere 54.1
2436 Male, age 74, both hemispheres 49.8
Parahippocampal cortex
nTPM: 71.7
2622 Female, age 67, right hemisphere 96.3
2532 Female, age 72, left hemisphere 94.1
2245 Female, age 91, both hemispheres 88.2
2692 Male, age 74, both hemispheres 74.5
2693 Female, age 94, both hemispheres 64.6
1850 Male, age 80, both hemispheres 61.4
1990 Female, age 91, right hemisphere 61.1
2018 Male, age 76, both hemispheres 61.0
2250 Female, age 67, right hemisphere 59.2
1933 Female, age 85, both hemispheres 56.6
Perirhinal gyrus
nTPM: 67.1
1794 Male, age 80, right hemisphere 74.4
2848 Male, age 76, right hemisphere 71.5
2521 Female, age 94, right hemisphere 65.6
1841 Female, age 85, right hemisphere 65.2
1847 Female, age 91, left hemisphere 58.7
Subiculum
nTPM: 61.3
2619 Male, age 74, both hemispheres 71.0
2438 Female, age 94, left hemisphere 70.4
1977 Female, age 85, both hemispheres 61.9
2042 Male, age 76, both hemispheres 58.8
1901 Male, age 80, both hemispheres 56.6
2729 Female, age 91, right hemisphere 49.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.0
Samples: 197

Max nTPM: 56.5
Min nTPM: 19.9
Std nTPM: 7.1
Median nTPM: 33.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 52.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 52.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 50.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 49.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 49.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 48.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 48.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 47.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 84.2
FF:10153-102I9 76 years, female 109.3
FF:10169-103B7 60 years, female 59.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.9
Sample A Female 17.7
Sample B Female 12.9
Sample C Male 15.0
Sample D Male 13.4
Dorsal hippocampus
nTPM: 13.8
Samples: 4

Max nTPM: 14.5
Min nTPM: 13.0
Sample A Female 14.3
Sample B Female 13.5
Sample C Male 14.5
Sample D Male 13.0
Entorhinal cortex
nTPM: 14.6
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.6
Sample A Female 16.4
Sample B Female 12.6
Sample C Male 14.5
Sample D Male 15.0
Ventral hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 17.3
Min nTPM: 12.7
Sample A Female 13.1
Sample B Female 12.7
Sample C Male 17.3
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 24.1
Min nTPM: 17.9
Sample A Male 24.1
Sample B Male 20.2
Sample C Female 18.7
Sample D Female 17.9
Hippocampal formation
nTPM: 17.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.8
Sample A Male 16.7
Sample B Male 19.7
Sample C Female 14.8
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
583870 Antisense, RP_040831_01_C10, Mouse strain C57BL/6J (56 days, male) 11.2

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