PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:245.0 nTPM
FANTOM5:45.1 Scaled Tags Per Million
Pig:93.6 nTPM
Mouse:83.5 nTPM
Allen mouse:5.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 245.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 190.4
2301 Female, age 85, both hemispheres 219.5
1984 Male, age 76, both hemispheres 200.5
2090 Male, age 80, both hemispheres 176.6
2188 Female, age 91, both hemispheres 165.1
Area postrema
nTPM: 241.2
2799 Male, age 61, both hemispheres 380.4
2306 Male, age 80, both hemispheres 204.4
2054 Male, age 76, both hemispheres 138.7
Dorsal cochlear nucleus
nTPM: 220.4
2802 Male, age 74, right hemisphere 286.4
2378 Male, age 80, both hemispheres 234.1
2370 Male, age 61, both hemispheres 217.0
2058 Male, age 76, both hemispheres 184.2
2187 Female, age 91, both hemispheres 180.4
Dorsal medullary reticular nucleus
nTPM: 192.1
2088 Male, age 76, both hemispheres 220.6
2373 Male, age 61, both hemispheres 189.5
2040 Female, age 85, both hemispheres 166.1
Dorsal motor vagal complex
nTPM: 171.2
2797 Male, age 61, both hemispheres 266.9
2185 Male, age 76, both hemispheres 249.5
2643 Male, age 74, both hemispheres 163.6
2000 Male, age 74, unknown 160.2
2844 Male, age 55, unknown 154.5
2133 Female, age 91, both hemispheres 146.6
2807 Female, age 85, both hemispheres 124.7
2813 Female, age 72, unknown 103.4
Dorsal tegmental nucleus
nTPM: 181.9
2083 Male, age 80, both hemispheres 199.8
1936 Male, age 76, left hemisphere 199.0
2326 Male, age 74, both hemispheres 179.6
2358 Male, age 61, both hemispheres 149.2
Dorsolateral tegmental area
nTPM: 173.5
2337 Male, age 61, both hemispheres 225.9
2654 Male, age 80, both hemispheres 200.4
2751 Female, age 85, both hemispheres 176.0
2360 Male, age 74, both hemispheres 137.1
2141 Male, age 76, both hemispheres 128.0
Gigantocellular reticular nuclei, medullary
nTPM: 191.5
2314 Male, age 61, both hemispheres 235.6
2387 Female, age 91, both hemispheres 210.0
2022 Male, age 76, right hemisphere 193.5
2310 Male, age 80, both hemispheres 186.2
2462 Male, age 74, both hemispheres 162.7
1876 Female, age 85, both hemispheres 161.1
Gigantocellular reticular nuclei, pars
nTPM: 199.4
2168 Male, age 76, both hemispheres 242.5
2706 Male, age 80, both hemispheres 199.3
2330 Male, age 80, both hemispheres 199.0
2084 Female, age 85, both hemispheres 180.7
2336 Male, age 61, both hemispheres 175.6
Inferior olive
nTPM: 227.2
2379 Male, age 80, both hemispheres 250.2
2178 Male, age 61, both hemispheres 245.4
2085 Female, age 85, both hemispheres 216.2
2628 Female, age 91, both hemispheres 216.1
2563 Male, age 74, both hemispheres 208.1
Kolliker-Fuse nucleus
nTPM: 186.3
2163 Male, age 80, both hemispheres 201.0
2793 Female, age 91, left hemisphere 184.7
2315 Male, age 76, right hemisphere 173.0
Lateral lemniscal nuclei
nTPM: 191.2
2169 Male, age 76, both hemispheres 258.6
2320 Female, age 91, left hemisphere 182.7
2746 Female, age 85, left hemisphere 174.6
2036 Male, age 80, both hemispheres 174.0
2453 Male, age 74, right hemisphere 166.1
Lateral medullary reticular nucleus
nTPM: 193.3
2044 Male, age 76, both hemispheres 224.2
2852 Male, age 80, both hemispheres 208.6
2804 Female, age 91, both hemispheres 207.2
2374 Male, age 61, both hemispheres 202.8
2190 Female, age 85, both hemispheres 167.7
2305 Male, age 74, both hemispheres 149.5
Lateral parabrachial nucleus
nTPM: 197.4
2790 Male, age 61, both hemispheres 248.3
2792 Male, age 76, both hemispheres 194.8
2139 Female, age 85, right hemisphere 180.2
2013 Male, age 80, both hemispheres 166.4
Lateral vestibular nucleus
nTPM: 245.0
2184 Male, age 76, both hemispheres 269.1
2311 Male, age 80, both hemispheres 221.0
Locus coeruleus
nTPM: 119.1
2317 Female, age 72, unknown 145.4
2162 Male, age 80, both hemispheres 137.9
2720 Male, age 74, both hemispheres 127.0
2123 Female, age 91, both hemispheres 117.3
2014 Male, age 55, unknown 107.1
1980 Male, age 76, both hemispheres 105.0
2788 Male, age 74, unknown 94.2
Medial olivary nucleus
nTPM: 185.9
1962 Male, age 76, both hemispheres 209.0
2138 Female, age 91, both hemispheres 191.9
2851 Male, age 80, both hemispheres 175.4
1943 Male, age 61, both hemispheres 167.1
Medial parabrachial nucleus
nTPM: 190.1
2156 Male, age 61, both hemispheres 218.9
2786 Male, age 76, both hemispheres 196.1
2463 Female, age 85, right hemisphere 189.4
2170 Female, age 91, both hemispheres 183.7
2854 Male, age 80, both hemispheres 162.6
Medial periolivary nuclei
nTPM: 190.6
2063 Male, age 76, both hemispheres 253.7
2171 Female, age 85, both hemispheres 205.7
2458 Female, age 91, both hemispheres 173.3
2081 Male, age 80, both hemispheres 162.8
2791 Male, age 74, right hemisphere 157.7
Medial vestibular nucleus
nTPM: 202.8
2093 Male, age 80, both hemispheres 248.1
2624 Male, age 61, both hemispheres 207.1
2803 Female, age 91, both hemispheres 205.8
2801 Male, age 74, both hemispheres 193.5
2134 Male, age 76, both hemispheres 186.9
2743 Female, age 85, both hemispheres 175.6
Motor facial nucleus
nTPM: 202.1
2062 Male, age 76, both hemispheres 277.7
2795 Female, age 91, both hemispheres 258.4
2126 Male, age 61, both hemispheres 183.0
2327 Male, age 80, both hemispheres 176.8
2697 Female, age 85, both hemispheres 166.5
2365 Male, age 74, right hemisphere 150.5
Motor hypoglossal nucleus
nTPM: 159.4
2125 Female, age 91, both hemispheres 208.7
2182 Male, age 80, both hemispheres 186.9
2132 Female, age 85, both hemispheres 164.6
2461 Male, age 61, both hemispheres 130.0
2277 Male, age 76, both hemispheres 107.0
Motor trigeminal nucleus
nTPM: 180.1
2309 Male, age 76, both hemispheres 201.3
2335 Male, age 61, both hemispheres 182.6
2321 Female, age 91, both hemispheres 180.4
2560 Male, age 74, both hemispheres 179.9
2079 Male, age 80, both hemispheres 156.3
Nuclei of the trapezoid body
nTPM: 199.8
1983 Male, age 76, both hemispheres 243.2
2368 Female, age 91, both hemispheres 216.9
2735 Female, age 85, both hemispheres 197.9
2166 Male, age 80, both hemispheres 190.6
2159 Male, age 61, both hemispheres 150.6
Nucleus ambiguus
nTPM: 220.7
2071 Male, age 76, both hemispheres 239.3
2096 Female, age 85, both hemispheres 202.1
Nucleus cuneatus
nTPM: 239.6
2100 Male, age 76, both hemispheres 333.6
2131 Male, age 76, both hemispheres 282.3
2805 Female, age 91, both hemispheres 264.0
2564 Male, age 74, both hemispheres 249.7
2380 Male, age 80, both hemispheres 215.7
2376 Male, age 61, both hemispheres 210.8
2808 Female, age 85, both hemispheres 206.6
2562 Male, age 61, both hemispheres 200.9
2381 Male, age 80, both hemispheres 192.6
Nucleus gracilis
nTPM: 196.6
2299 Female, age 85, both hemispheres 219.4
2382 Male, age 80, both hemispheres 194.5
2627 Male, age 74, both hemispheres 176.0
Nucleus raphe magnus
nTPM: 179.4
2051 Male, age 76, both hemispheres 247.7
2328 Male, age 80, both hemispheres 185.9
2172 Female, age 85, both hemispheres 179.6
2459 Female, age 91, both hemispheres 175.8
2455 Male, age 74, both hemispheres 151.5
2160 Male, age 61, both hemispheres 136.1
Nucleus raphe obscurus
nTPM: 203.0
2142 Male, age 76, midline 223.8
2845 Female, age 85, midline 193.2
2800 Male, age 61, midline 191.9
Nucleus raphe pallidus
nTPM: 184.8
2145 Male, age 76, midline 227.0
1924 Male, age 61, midline 166.8
2183 Male, age 80, midline 160.8
Nucleus tractus solitarii
nTPM: 116.2
2191 Female, age 85, both hemispheres 130.8
2144 Female, age 91, right hemisphere 120.4
2656 Male, age 76, both hemispheres 108.5
2307 Male, age 80, both hemispheres 105.2
Paramedian reticular nucleus
nTPM: 161.6
2057 Male, age 80, both hemispheres 189.1
2050 Female, age 85, both hemispheres 165.6
2052 Male, age 76, both hemispheres 152.7
2313 Male, age 61, both hemispheres 139.0
Parvicellular reticular nuclei
nTPM: 193.7
2095 Male, age 76, both hemispheres 227.6
2119 Male, age 80, both hemispheres 177.8
2558 Male, age 74, both hemispheres 175.8
Parvicellular reticular nuclei, medullary
nTPM: 180.9
2091 Female, age 85, both hemispheres 188.8
2181 Male, age 80, left hemisphere 177.0
2189 Female, age 91, both hemispheres 176.9
Pedunculopontine tegmental nucleus
nTPM: 166.7
2338 Male, age 61, both hemispheres 198.7
2334 Male, age 80, both hemispheres 159.5
1921 Female, age 85, both hemispheres 142.1
Peritrigeminal nucleus
nTPM: 193.2
2136 Male, age 76, both hemispheres 235.1
2067 Female, age 85, both hemispheres 183.3
2179 Male, age 61, both hemispheres 161.3
Pontine nuclei
nTPM: 180.0
1968 Male, age 76, left hemisphere 270.8
1863 Male, age 55, unknown 199.2
2109 Female, age 72, unknown 193.5
2787 Female, age 85, both hemispheres 187.1
2115 Male, age 80, left hemisphere 173.4
2319 Female, age 91, both hemispheres 158.1
2454 Male, age 74, left hemisphere 138.1
2727 Male, age 61, right hemisphere 119.5
Pontine raphe nucleus
nTPM: 142.4
2122 Female, age 85, midline 144.4
2853 Male, age 76, midline 140.4
Posteroventral cochlear nucleus
nTPM: 183.6
2371 Male, age 61, both hemispheres 220.1
2341 Male, age 80, both hemispheres 198.9
2070 Male, age 76, both hemispheres 178.0
2752 Female, age 85, both hemispheres 173.3
2135 Female, age 91, both hemispheres 147.9
Prepositus hypoglossal nucleus
nTPM: 196.1
2855 Female, age 85, right hemisphere 214.1
2086 Male, age 80, both hemispheres 178.1
Principal sensory trigeminal nucleus
nTPM: 181.7
2324 Male, age 76, both hemispheres 252.0
2367 Female, age 91, left hemisphere 160.9
2008 Male, age 80, left hemisphere 157.2
2158 Male, age 61, both hemispheres 156.8
Reticular pontine nucleus, caudal
nTPM: 192.8
2092 Male, age 76, both hemispheres 217.5
2457 Female, age 91, both hemispheres 192.3
2332 Male, age 80, right hemisphere 186.2
2559 Male, age 74, both hemispheres 175.1
Reticular pontine nucleus, oral
nTPM: 160.7
2167 Male, age 76, both hemispheres 179.5
1939 Male, age 80, both hemispheres 176.0
2012 Female, age 85, both hemispheres 153.8
2366 Female, age 91, both hemispheres 148.7
2361 Male, age 74, both hemispheres 145.3
Reticulotegmental nucleus
nTPM: 199.5
2322 Female, age 91, both hemispheres 219.0
2333 Male, age 80, both hemispheres 200.2
2452 Male, age 74, both hemispheres 192.5
2325 Male, age 76, both hemispheres 186.4
Spinal trigeminal nucleus, caudal
nTPM: 200.2
2447 Male, age 76, both hemispheres 290.9
2390 Female, age 91, both hemispheres 210.5
2308 Male, age 80, both hemispheres 184.1
2312 Male, age 61, both hemispheres 169.4
2642 Male, age 74, both hemispheres 146.2
Spinal trigeminal nucleus, interpolar
nTPM: 178.5
2066 Male, age 76, right hemisphere 205.1
2625 Male, age 61, both hemispheres 198.7
2389 Female, age 91, both hemispheres 179.5
2033 Male, age 80, both hemispheres 166.0
2386 Female, age 85, both hemispheres 143.1
Spinal trigeminal nucleus, oral
nTPM: 190.3
2164 Male, age 80, both hemispheres 227.1
1978 Male, age 76, both hemispheres 175.4
2737 Female, age 85, both hemispheres 168.5
Spinal vestibular nucleus
nTPM: 201.7
2748 Male, age 76, both hemispheres 221.5
2384 Male, age 74, both hemispheres 217.2
2806 Female, age 85, both hemispheres 204.9
2186 Female, age 91, both hemispheres 194.6
2780 Male, age 80, both hemispheres 191.3
2796 Male, age 61, both hemispheres 180.9
Subcoeruleus area
nTPM: 176.6
2089 Male, age 76, left hemisphere 228.2
2451 Male, age 74, both hemispheres 179.0
2369 Female, age 85, left hemisphere 175.3
1958 Male, age 80, both hemispheres 162.0
2323 Female, age 91, left hemisphere 138.8
Superior olive
nTPM: 183.6
2020 Male, age 76, both hemispheres 226.4
2561 Female, age 91, both hemispheres 192.4
2329 Male, age 80, right hemisphere 191.0
1875 Female, age 85, both hemispheres 162.0
2364 Male, age 74, right hemisphere 146.1
Superior vestibular nucleus
nTPM: 171.9
2015 Male, age 80, both hemispheres 197.1
2061 Male, age 76, both hemispheres 187.5
2383 Male, age 74, both hemispheres 131.2
Ventral medullary reticular nucleus
nTPM: 202.5
2372 Male, age 61, both hemispheres 207.7
2060 Male, age 76, both hemispheres 197.4
Ventral periolivary nuclei
nTPM: 188.2
2165 Male, age 80, both hemispheres 199.2
2023 Male, age 76, both hemispheres 197.6
2130 Female, age 85, both hemispheres 184.0
2794 Female, age 91, left hemisphere 171.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 196.9
1986 Male, age 76, both hemispheres 225.2
2302 Female, age 91, both hemispheres 215.1
2118 Male, age 80, both hemispheres 184.0
2741 Female, age 85, both hemispheres 180.3
2180 Male, age 61, both hemispheres 179.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 190.5
1959 Male, age 76, both hemispheres 221.5
2456 Female, age 91, both hemispheres 213.4
2359 Male, age 61, both hemispheres 198.0
2161 Male, age 80, both hemispheres 185.5
2840 Female, age 85, both hemispheres 166.5
2449 Male, age 74, both hemispheres 158.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 44.0
FF:10182-103D2 60 years, female 46.6
FF:10165-103B3 76 years, female 41.4
Medulla oblongata
Scaled Tags Per Million: 39.4
FF:10038-101F2 18-64 years, mixed 44.9
FF:10155-103A2 76 years, female 39.6
FF:10174-103C3 60 years, female 33.7
Pons
Scaled Tags Per Million: 45.1
FF:10033-101E6 18-54 years, mixed 45.1

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 93.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 93.6
Samples: 4

Max nTPM: 106.9
Min nTPM: 79.5
Sample A Female 92.1
Sample B Female 106.9
Sample C Male 95.9
Sample D Male 79.5
Pons
nTPM: 72.8
Samples: 4

Max nTPM: 88.5
Min nTPM: 59.9
Sample A Female 75.1
Sample B Female 67.8
Sample C Male 59.9
Sample D Male 88.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 83.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 83.5
Samples: 4

Max nTPM: 86.4
Min nTPM: 79.1
Sample A Male 86.4
Sample B Male 84.8
Sample C Female 79.1
Sample D Female 83.5

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.8
70743871 Antisense, RP_050725_01_G11, Mouse strain C57BL/6J (56 days, male) 7.8
77910763 Antisense, RP_070208_04_G01, Mouse strain C57BL/6J (56 days, male) 4.9
671260 Antisense, RP_040914_02_C11, Mouse strain C57BL/6J (56 days, male) 4.8
Pons
Expression energy: 4.3
70743871 Antisense, RP_050725_01_G11, Mouse strain C57BL/6J (56 days, male) 5.9
77910763 Antisense, RP_070208_04_G01, Mouse strain C57BL/6J (56 days, male) 3.6
671260 Antisense, RP_040914_02_C11, Mouse strain C57BL/6J (56 days, male) 3.5

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