HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:53.0 nTPM
HPA Brain:53.4 nTPM
GTEx:53.0 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:0.9 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 53.4
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
1911 Female, age 85, right hemisphere 43.5
2529 Female, age 94, left hemisphere 43.0
1898 Male, age 80, left hemisphere 32.2
2621 Female, age 67, right hemisphere 31.9
2148 Female, age 91, left hemisphere 28.1
1855 Male, age 76, left hemisphere 18.1
Dentate gyrus
nTPM: 36.4
2530 Female, age 94, left hemisphere 72.2
2010 Male, age 76, both hemispheres 37.7
2528 Male, age 74, both hemispheres 33.0
2246 Female, age 85, both hemispheres 28.4
2531 Female, age 67, both hemispheres 28.0
1927 Female, age 91, both hemispheres 19.2
Entorhinal gyrus
nTPM: 42.5
2117 Female, age 91, right hemisphere 82.8
2764 Male, age 80, right hemisphere 61.9
2686 Male, age 75, right hemisphere 30.0
1787 Male, age 76, left hemisphere 27.7
1938 Female, age 85, left hemisphere 26.9
2613 Female, age 94, left hemisphere 25.7
Hippocampus, CA1
nTPM: 21.8
2527 Male, age 74, both hemispheres 29.0
1873 Female, age 85, both hemispheres 26.1
2082 Female, age 91, right hemisphere 24.7
2749 Male, age 80, left hemisphere 22.7
2045 Male, age 76, both hemispheres 6.6
Hippocampus, CA2
nTPM: 35.5
1963 Male, age 80, left hemisphere 54.6
2249 Male, age 74, both hemispheres 40.2
2437 Female, age 94, left hemisphere 35.7
1940 Female, age 85, left hemisphere 34.7
2113 Female, age 91, right hemisphere 31.0
1892 Male, age 76, both hemispheres 16.7
Hippocampus, CA3
nTPM: 21.6
1891 Female, age 85, both hemispheres 48.9
1867 Male, age 76, both hemispheres 27.9
2436 Male, age 74, both hemispheres 17.4
2861 Female, age 67, both hemispheres 13.9
2137 Male, age 80, left hemisphere 12.1
2620 Female, age 94, left hemisphere 9.7
Parahippocampal cortex
nTPM: 28.1
2532 Female, age 72, left hemisphere 49.5
1990 Female, age 91, right hemisphere 46.4
2692 Male, age 74, both hemispheres 39.8
2245 Female, age 91, both hemispheres 29.8
2018 Male, age 76, both hemispheres 28.2
1933 Female, age 85, both hemispheres 25.8
1850 Male, age 80, both hemispheres 24.9
2250 Female, age 67, right hemisphere 13.3
2693 Female, age 94, both hemispheres 12.0
2622 Female, age 67, right hemisphere 11.4
Perirhinal gyrus
nTPM: 15.5
1794 Male, age 80, right hemisphere 18.5
2848 Male, age 76, right hemisphere 18.2
2521 Female, age 94, right hemisphere 16.1
1847 Female, age 91, left hemisphere 13.4
1841 Female, age 85, right hemisphere 11.1
Subiculum
nTPM: 53.4
2042 Male, age 76, both hemispheres 79.7
1901 Male, age 80, both hemispheres 70.7
1977 Female, age 85, both hemispheres 54.9
2438 Female, age 94, left hemisphere 45.5
2619 Male, age 74, both hemispheres 35.6
2729 Female, age 91, right hemisphere 34.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.0
Samples: 197

Max nTPM: 210.4
Min nTPM: 3.9
Std nTPM: 38.2
Median nTPM: 43.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 210.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 188.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 188.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 180.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 180.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 175.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 136.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 129.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 127.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 126.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 117.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10153-102I9 76 years, female 36.5
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Subiculum
nTPM: 4.4
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.2
Sample A Female 5.9
Sample B Female 4.8
Sample C Male 3.5
Sample D Male 3.2
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 23.3
Min nTPM: 2.8
Sample A Female 23.3
Sample B Female 10.2
Sample C Male 19.1
Sample D Male 2.8
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 6.9
Min nTPM: 2.8
Sample A Female 2.8
Sample B Female 6.9
Sample C Male 2.9
Sample D Male 3.9
Ventral hippocampus
nTPM: 8.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 4.4
Sample A Female 11.6
Sample B Female 4.4
Sample C Male 9.9
Sample D Male 9.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.7
Samples: 4

Max nTPM: 1.8
Min nTPM: 0.0
Sample A Male 1.8
Sample B Male 0.8
Sample C Female 0.3
Sample D Female 0.0
Hippocampal formation
nTPM: 0.9
Samples: 4

Max nTPM: 1.6
Min nTPM: 0.2
Sample A Male 1.6
Sample B Male 1.4
Sample C Female 0.3
Sample D Female 0.2

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