HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:182.8 nTPM
HPA Brain:86.8 nTPM
GTEx:182.8 nTPM
FANTOM5:33.1 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:25.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059185
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 86.8
Sample id Sample description nTPM
Hippocampus
nTPM: 85.2
1898 Male, age 80, left hemisphere 95.8
2529 Female, age 94, left hemisphere 90.8
1855 Male, age 76, left hemisphere 85.8
2621 Female, age 67, right hemisphere 84.3
2148 Female, age 91, left hemisphere 81.4
1911 Female, age 85, right hemisphere 73.2
Dentate gyrus
nTPM: 76.4
2530 Female, age 94, left hemisphere 101.1
2010 Male, age 76, both hemispheres 77.4
2528 Male, age 74, both hemispheres 77.0
2531 Female, age 67, both hemispheres 71.9
2246 Female, age 85, both hemispheres 71.3
1927 Female, age 91, both hemispheres 59.7
Entorhinal gyrus
nTPM: 86.8
2117 Female, age 91, right hemisphere 97.5
2686 Male, age 75, right hemisphere 94.2
2764 Male, age 80, right hemisphere 88.2
1787 Male, age 76, left hemisphere 81.5
2613 Female, age 94, left hemisphere 80.7
1938 Female, age 85, left hemisphere 78.6
Hippocampus, CA1
nTPM: 76.3
2749 Male, age 80, left hemisphere 82.3
2082 Female, age 91, right hemisphere 81.4
2527 Male, age 74, both hemispheres 76.6
1873 Female, age 85, both hemispheres 76.2
2045 Male, age 76, both hemispheres 65.2
Hippocampus, CA2
nTPM: 79.9
1963 Male, age 80, left hemisphere 97.6
2113 Female, age 91, right hemisphere 83.1
2437 Female, age 94, left hemisphere 79.8
1940 Female, age 85, left hemisphere 78.5
1892 Male, age 76, both hemispheres 70.5
2249 Male, age 74, both hemispheres 69.7
Hippocampus, CA3
nTPM: 78.1
2861 Female, age 67, both hemispheres 103.1
2436 Male, age 74, both hemispheres 77.2
2137 Male, age 80, left hemisphere 76.4
1867 Male, age 76, both hemispheres 75.8
1891 Female, age 85, both hemispheres 75.2
2620 Female, age 94, left hemisphere 61.0
Parahippocampal cortex
nTPM: 75.0
2018 Male, age 76, both hemispheres 84.7
2692 Male, age 74, both hemispheres 80.6
2622 Female, age 67, right hemisphere 77.9
2532 Female, age 72, left hemisphere 76.9
1933 Female, age 85, both hemispheres 75.4
2245 Female, age 91, both hemispheres 75.2
1850 Male, age 80, both hemispheres 74.9
1990 Female, age 91, right hemisphere 72.7
2250 Female, age 67, right hemisphere 68.3
2693 Female, age 94, both hemispheres 63.4
Perirhinal gyrus
nTPM: 73.2
1847 Female, age 91, left hemisphere 80.3
1794 Male, age 80, right hemisphere 74.9
1841 Female, age 85, right hemisphere 74.1
2521 Female, age 94, right hemisphere 70.5
2848 Male, age 76, right hemisphere 66.4
Subiculum
nTPM: 79.1
2619 Male, age 74, both hemispheres 86.9
2042 Male, age 76, both hemispheres 83.0
1977 Female, age 85, both hemispheres 82.4
2729 Female, age 91, right hemisphere 77.5
1901 Male, age 80, both hemispheres 75.2
2438 Female, age 94, left hemisphere 69.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 182.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 182.8
Samples: 197

Max nTPM: 344.2
Min nTPM: 87.6
Std nTPM: 49.2
Median nTPM: 174.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 344.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 319.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 318.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 315.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 301.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 297.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 294.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 293.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 291.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 275.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 274.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 33.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.1
FF:10153-102I9 76 years, female 34.1
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 25.4
Min nTPM: 18.2
Sample A Female 25.4
Sample B Female 21.2
Sample C Male 20.8
Sample D Male 18.2
Dorsal hippocampus
nTPM: 24.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 15.5
Sample A Female 30.1
Sample B Female 22.0
Sample C Male 28.2
Sample D Male 15.5
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 26.4
Min nTPM: 15.7
Sample A Female 23.1
Sample B Female 24.3
Sample C Male 26.4
Sample D Male 15.7
Ventral hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 28.9
Min nTPM: 19.7
Sample A Female 21.9
Sample B Female 19.7
Sample C Male 28.9
Sample D Male 21.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 28.9
Min nTPM: 20.9
Sample A Male 22.8
Sample B Male 24.8
Sample C Female 28.9
Sample D Female 20.9
Hippocampal formation
nTPM: 25.0
Samples: 4

Max nTPM: 27.7
Min nTPM: 22.6
Sample A Male 27.7
Sample B Male 22.6
Sample C Female 24.6
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68080705 Antisense, RP_040929_01_G04, Mouse strain C57BL/6J (56 days, male) 0.2

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