HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:46.9 nTPM
HPA Brain:79.9 nTPM
GTEx:46.9 nTPM
FANTOM5:69.2 Scaled Tags Per Million
Pig:23.6 nTPM
Mouse:16.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 79.9
Sample id Sample description nTPM
Hippocampus
nTPM: 73.0
1911 Female, age 85, right hemisphere 83.8
2621 Female, age 67, right hemisphere 77.1
2529 Female, age 94, left hemisphere 77.0
1855 Male, age 76, left hemisphere 75.6
1898 Male, age 80, left hemisphere 63.3
2148 Female, age 91, left hemisphere 61.2
Dentate gyrus
nTPM: 64.9
2010 Male, age 76, both hemispheres 90.4
2528 Male, age 74, both hemispheres 71.4
2246 Female, age 85, both hemispheres 67.4
2530 Female, age 94, left hemisphere 66.4
1927 Female, age 91, both hemispheres 49.9
2531 Female, age 67, both hemispheres 43.6
Entorhinal gyrus
nTPM: 57.8
2117 Female, age 91, right hemisphere 93.7
1787 Male, age 76, left hemisphere 66.0
1938 Female, age 85, left hemisphere 59.7
2686 Male, age 75, right hemisphere 47.3
2764 Male, age 80, right hemisphere 45.6
2613 Female, age 94, left hemisphere 34.6
Hippocampus, CA1
nTPM: 62.2
2082 Female, age 91, right hemisphere 73.1
2527 Male, age 74, both hemispheres 70.7
2045 Male, age 76, both hemispheres 65.1
1873 Female, age 85, both hemispheres 64.3
2749 Male, age 80, left hemisphere 37.8
Hippocampus, CA2
nTPM: 73.6
2249 Male, age 74, both hemispheres 102.2
1940 Female, age 85, left hemisphere 88.0
2113 Female, age 91, right hemisphere 76.4
1963 Male, age 80, left hemisphere 66.1
2437 Female, age 94, left hemisphere 60.7
1892 Male, age 76, both hemispheres 48.1
Hippocampus, CA3
nTPM: 62.6
1891 Female, age 85, both hemispheres 91.7
2436 Male, age 74, both hemispheres 86.9
1867 Male, age 76, both hemispheres 65.5
2861 Female, age 67, both hemispheres 47.1
2620 Female, age 94, left hemisphere 46.9
2137 Male, age 80, left hemisphere 37.5
Parahippocampal cortex
nTPM: 59.6
2018 Male, age 76, both hemispheres 86.6
2532 Female, age 72, left hemisphere 66.2
2692 Male, age 74, both hemispheres 60.8
1850 Male, age 80, both hemispheres 60.6
1990 Female, age 91, right hemisphere 59.3
1933 Female, age 85, both hemispheres 57.1
2250 Female, age 67, right hemisphere 55.9
2245 Female, age 91, both hemispheres 54.6
2622 Female, age 67, right hemisphere 48.7
2693 Female, age 94, both hemispheres 46.7
Perirhinal gyrus
nTPM: 48.5
1841 Female, age 85, right hemisphere 54.5
1847 Female, age 91, left hemisphere 52.9
2848 Male, age 76, right hemisphere 46.3
2521 Female, age 94, right hemisphere 45.8
1794 Male, age 80, right hemisphere 43.2
Subiculum
nTPM: 79.9
2042 Male, age 76, both hemispheres 102.6
2438 Female, age 94, left hemisphere 93.6
2619 Male, age 74, both hemispheres 81.6
1901 Male, age 80, both hemispheres 68.9
1977 Female, age 85, both hemispheres 66.6
2729 Female, age 91, right hemisphere 66.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.9
Samples: 197

Max nTPM: 136.9
Min nTPM: 12.4
Std nTPM: 22.1
Median nTPM: 41.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 136.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 132.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 110.3
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 104.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 102.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 99.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 95.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 94.8
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 94.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 92.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 86.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.2
FF:10153-102I9 76 years, female 88.6
FF:10169-103B7 60 years, female 49.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.6
Pig sample Sample description nTPM
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 19.8
Sample A Female 19.9
Sample B Female 19.8
Sample C Male 20.8
Sample D Male 25.0
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 32.2
Min nTPM: 12.6
Sample A Female 29.3
Sample B Female 20.2
Sample C Male 32.2
Sample D Male 12.6
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.7
Sample A Female 15.9
Sample B Female 12.7
Sample C Male 16.6
Sample D Male 16.1
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.0
Min nTPM: 17.4
Sample A Female 23.0
Sample B Female 17.4
Sample C Male 20.3
Sample D Male 20.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.2
Sample A Male 13.6
Sample B Male 10.7
Sample C Female 11.7
Sample D Female 10.2
Hippocampal formation
nTPM: 16.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 13.7
Sample A Male 13.7
Sample B Male 15.0
Sample C Female 19.0
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68080674 Antisense, RP_040929_01_D04, Mouse strain C57BL/6J (56 days, male) 0.1

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