HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:21.9 nTPM
HPA Brain:24.1 nTPM
GTEx:21.9 nTPM
FANTOM5:69.7 Scaled Tags Per Million
Pig:38.4 nTPM
Mouse:70.1 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029272
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Hippocampus
nTPM: 20.2
1898 Male, age 80, left hemisphere 21.3
1911 Female, age 85, right hemisphere 21.2
1855 Male, age 76, left hemisphere 20.0
2529 Female, age 94, left hemisphere 19.8
2148 Female, age 91, left hemisphere 19.7
2621 Female, age 67, right hemisphere 19.0
Dentate gyrus
nTPM: 21.6
1927 Female, age 91, both hemispheres 24.1
2010 Male, age 76, both hemispheres 22.4
2530 Female, age 94, left hemisphere 21.7
2246 Female, age 85, both hemispheres 21.4
2531 Female, age 67, both hemispheres 20.2
2528 Male, age 74, both hemispheres 19.5
Entorhinal gyrus
nTPM: 21.7
1938 Female, age 85, left hemisphere 23.7
2613 Female, age 94, left hemisphere 23.5
1787 Male, age 76, left hemisphere 21.6
2764 Male, age 80, right hemisphere 21.3
2686 Male, age 75, right hemisphere 20.7
2117 Female, age 91, right hemisphere 19.1
Hippocampus, CA1
nTPM: 22.9
2045 Male, age 76, both hemispheres 26.1
1873 Female, age 85, both hemispheres 24.1
2749 Male, age 80, left hemisphere 24.0
2527 Male, age 74, both hemispheres 21.0
2082 Female, age 91, right hemisphere 19.3
Hippocampus, CA2
nTPM: 21.5
1892 Male, age 76, both hemispheres 24.5
2113 Female, age 91, right hemisphere 22.6
1940 Female, age 85, left hemisphere 21.7
2437 Female, age 94, left hemisphere 20.5
2249 Male, age 74, both hemispheres 19.9
1963 Male, age 80, left hemisphere 19.6
Hippocampus, CA3
nTPM: 21.7
2620 Female, age 94, left hemisphere 23.5
1867 Male, age 76, both hemispheres 23.2
2137 Male, age 80, left hemisphere 22.1
1891 Female, age 85, both hemispheres 21.8
2861 Female, age 67, both hemispheres 20.5
2436 Male, age 74, both hemispheres 19.1
Parahippocampal cortex
nTPM: 22.7
1850 Male, age 80, both hemispheres 27.3
2693 Female, age 94, both hemispheres 26.6
1933 Female, age 85, both hemispheres 24.4
2532 Female, age 72, left hemisphere 23.2
2245 Female, age 91, both hemispheres 22.6
1990 Female, age 91, right hemisphere 22.2
2250 Female, age 67, right hemisphere 21.7
2692 Male, age 74, both hemispheres 20.4
2018 Male, age 76, both hemispheres 20.3
2622 Female, age 67, right hemisphere 18.0
Perirhinal gyrus
nTPM: 24.1
1841 Female, age 85, right hemisphere 24.9
1847 Female, age 91, left hemisphere 24.8
2848 Male, age 76, right hemisphere 24.8
1794 Male, age 80, right hemisphere 24.3
2521 Female, age 94, right hemisphere 21.7
Subiculum
nTPM: 21.3
2729 Female, age 91, right hemisphere 22.4
2042 Male, age 76, both hemispheres 21.7
1901 Male, age 80, both hemispheres 21.4
1977 Female, age 85, both hemispheres 21.4
2438 Female, age 94, left hemisphere 20.4
2619 Male, age 74, both hemispheres 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.9
Samples: 197

Max nTPM: 59.6
Min nTPM: 11.6
Std nTPM: 6.1
Median nTPM: 20.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 59.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 40.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 38.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 36.8
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 34.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 33.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 33.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 33.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 32.6
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 32.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 31.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 69.7
FF:10169-103B7 60 years, female 83.0
FF:10153-102I9 76 years, female 56.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.4
Pig sample Sample description nTPM
Subiculum
nTPM: 38.4
Samples: 4

Max nTPM: 47.2
Min nTPM: 33.5
Sample A Female 47.2
Sample B Female 33.5
Sample C Male 37.2
Sample D Male 35.6
Dorsal hippocampus
nTPM: 36.9
Samples: 4

Max nTPM: 42.4
Min nTPM: 31.2
Sample A Female 42.4
Sample B Female 36.1
Sample C Male 37.9
Sample D Male 31.2
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 39.6
Min nTPM: 30.4
Sample A Female 35.7
Sample B Female 39.6
Sample C Male 38.3
Sample D Male 30.4
Ventral hippocampus
nTPM: 36.1
Samples: 4

Max nTPM: 40.9
Min nTPM: 33.2
Sample A Female 40.9
Sample B Female 33.2
Sample C Male 35.3
Sample D Male 34.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.6
Samples: 4

Max nTPM: 70.8
Min nTPM: 62.2
Sample A Male 62.2
Sample B Male 70.8
Sample C Female 67.5
Sample D Female 69.7
Hippocampal formation
nTPM: 70.1
Samples: 4

Max nTPM: 75.6
Min nTPM: 66.0
Sample A Male 75.6
Sample B Male 66.0
Sample C Female 68.5
Sample D Female 70.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
68798950 Antisense, RP_050217_01_F06, Mouse strain C57BL/6J (56 days, male) 4.7

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