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TMEM87B
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                                  • TMEM87B
                                  BRAIN PONS AND MEDULLA Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
                                  MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
                                  ANTIBODIES
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                                  VALIDATION
                                  Brain proteome
                                  PONS AND MEDULLA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:11.7 nTPM
                                  FANTOM5:27.6 Scaled Tags Per Million
                                  Pig:13.1 nTPM
                                  Mouse:17.6 nTPM
                                  Allen mouse:0.5 Expression energy

                                  PONS AND MEDULLA - HPA Brain RNA-seq
                                  Max nTPM 11.7
                                  Sample id Sample description nTPM
                                  Anterior cochlear nucleus, ventral
                                  nTPM: 8.8
                                  2188 Female, age 91, both hemispheres 9.6
                                  2301 Female, age 85, both hemispheres 8.9
                                  2090 Male, age 80, both hemispheres 8.4
                                  1984 Male, age 76, both hemispheres 8.3
                                  Area postrema
                                  nTPM: 7.9
                                  2054 Male, age 76, both hemispheres 8.2
                                  2306 Male, age 80, both hemispheres 7.9
                                  2799 Male, age 61, both hemispheres 7.6
                                  Dorsal cochlear nucleus
                                  nTPM: 9.4
                                  2802 Male, age 74, right hemisphere 10.4
                                  2378 Male, age 80, both hemispheres 9.7
                                  2187 Female, age 91, both hemispheres 9.6
                                  2370 Male, age 61, both hemispheres 8.7
                                  2058 Male, age 76, both hemispheres 8.5
                                  Dorsal medullary reticular nucleus
                                  nTPM: 8.9
                                  2040 Female, age 85, both hemispheres 9.7
                                  2088 Male, age 76, both hemispheres 8.9
                                  2373 Male, age 61, both hemispheres 8.0
                                  Dorsal motor vagal complex
                                  nTPM: 8.5
                                  2797 Male, age 61, both hemispheres 10.5
                                  2807 Female, age 85, both hemispheres 9.1
                                  2185 Male, age 76, both hemispheres 8.5
                                  2133 Female, age 91, both hemispheres 8.4
                                  2813 Female, age 72, unknown 8.4
                                  2000 Male, age 74, unknown 8.1
                                  2844 Male, age 55, unknown 7.7
                                  2643 Male, age 74, both hemispheres 7.6
                                  Dorsal tegmental nucleus
                                  nTPM: 9.4
                                  2358 Male, age 61, both hemispheres 10.2
                                  2326 Male, age 74, both hemispheres 10.0
                                  1936 Male, age 76, left hemisphere 9.4
                                  2083 Male, age 80, both hemispheres 8.0
                                  Dorsolateral tegmental area
                                  nTPM: 9.1
                                  2751 Female, age 85, both hemispheres 9.7
                                  2337 Male, age 61, both hemispheres 9.6
                                  2360 Male, age 74, both hemispheres 8.9
                                  2141 Male, age 76, both hemispheres 8.8
                                  2654 Male, age 80, both hemispheres 8.6
                                  Gigantocellular reticular nuclei, medullary
                                  nTPM: 9.3
                                  2387 Female, age 91, both hemispheres 10.8
                                  2462 Male, age 74, both hemispheres 9.8
                                  1876 Female, age 85, both hemispheres 9.1
                                  2022 Male, age 76, right hemisphere 9.0
                                  2310 Male, age 80, both hemispheres 8.9
                                  2314 Male, age 61, both hemispheres 8.1
                                  Gigantocellular reticular nuclei, pars
                                  nTPM: 9.4
                                  2168 Male, age 76, both hemispheres 10.0
                                  2336 Male, age 61, both hemispheres 9.5
                                  2706 Male, age 80, both hemispheres 9.5
                                  2330 Male, age 80, both hemispheres 9.3
                                  2084 Female, age 85, both hemispheres 8.4
                                  Inferior olive
                                  nTPM: 9.3
                                  2379 Male, age 80, both hemispheres 10.1
                                  2178 Male, age 61, both hemispheres 10.0
                                  2085 Female, age 85, both hemispheres 9.6
                                  2563 Male, age 74, both hemispheres 8.4
                                  2628 Female, age 91, both hemispheres 8.2
                                  Kolliker-Fuse nucleus
                                  nTPM: 8.3
                                  2163 Male, age 80, both hemispheres 8.6
                                  2793 Female, age 91, left hemisphere 8.4
                                  2315 Male, age 76, right hemisphere 8.0
                                  Lateral lemniscal nuclei
                                  nTPM: 9.6
                                  2036 Male, age 80, both hemispheres 10.1
                                  2169 Male, age 76, both hemispheres 10.1
                                  2453 Male, age 74, right hemisphere 9.8
                                  2320 Female, age 91, left hemisphere 9.2
                                  2746 Female, age 85, left hemisphere 8.6
                                  Lateral medullary reticular nucleus
                                  nTPM: 8.8
                                  2305 Male, age 74, both hemispheres 10.7
                                  2044 Male, age 76, both hemispheres 9.2
                                  2190 Female, age 85, both hemispheres 8.6
                                  2852 Male, age 80, both hemispheres 8.2
                                  2804 Female, age 91, both hemispheres 8.1
                                  2374 Male, age 61, both hemispheres 7.7
                                  Lateral parabrachial nucleus
                                  nTPM: 8.8
                                  2790 Male, age 61, both hemispheres 9.4
                                  2013 Male, age 80, both hemispheres 9.1
                                  2792 Male, age 76, both hemispheres 8.7
                                  2139 Female, age 85, right hemisphere 8.1
                                  Lateral vestibular nucleus
                                  nTPM: 8.1
                                  2184 Male, age 76, both hemispheres 8.2
                                  2311 Male, age 80, both hemispheres 8.0
                                  Locus coeruleus
                                  nTPM: 11.7
                                  2014 Male, age 55, unknown 14.8
                                  2788 Male, age 74, unknown 12.7
                                  1980 Male, age 76, both hemispheres 11.8
                                  2720 Male, age 74, both hemispheres 11.6
                                  2317 Female, age 72, unknown 10.8
                                  2123 Female, age 91, both hemispheres 10.7
                                  2162 Male, age 80, both hemispheres 9.9
                                  Medial olivary nucleus
                                  nTPM: 8.3
                                  2851 Male, age 80, both hemispheres 8.7
                                  1962 Male, age 76, both hemispheres 8.5
                                  1943 Male, age 61, both hemispheres 8.0
                                  2138 Female, age 91, both hemispheres 7.9
                                  Medial parabrachial nucleus
                                  nTPM: 8.8
                                  2170 Female, age 91, both hemispheres 10.3
                                  2854 Male, age 80, both hemispheres 9.4
                                  2786 Male, age 76, both hemispheres 8.9
                                  2156 Male, age 61, both hemispheres 8.0
                                  2463 Female, age 85, right hemisphere 7.5
                                  Medial periolivary nuclei
                                  nTPM: 9.9
                                  2063 Male, age 76, both hemispheres 10.7
                                  2171 Female, age 85, both hemispheres 10.5
                                  2081 Male, age 80, both hemispheres 9.7
                                  2791 Male, age 74, right hemisphere 9.6
                                  2458 Female, age 91, both hemispheres 8.9
                                  Medial vestibular nucleus
                                  nTPM: 8.8
                                  2801 Male, age 74, both hemispheres 10.0
                                  2134 Male, age 76, both hemispheres 9.3
                                  2743 Female, age 85, both hemispheres 8.7
                                  2624 Male, age 61, both hemispheres 8.6
                                  2803 Female, age 91, both hemispheres 8.4
                                  2093 Male, age 80, both hemispheres 8.1
                                  Motor facial nucleus
                                  nTPM: 9.5
                                  2795 Female, age 91, both hemispheres 11.0
                                  2062 Male, age 76, both hemispheres 10.8
                                  2365 Male, age 74, right hemisphere 9.4
                                  2327 Male, age 80, both hemispheres 9.3
                                  2697 Female, age 85, both hemispheres 8.5
                                  2126 Male, age 61, both hemispheres 8.4
                                  Motor hypoglossal nucleus
                                  nTPM: 8.6
                                  2125 Female, age 91, both hemispheres 9.2
                                  2182 Male, age 80, both hemispheres 9.2
                                  2132 Female, age 85, both hemispheres 8.2
                                  2461 Male, age 61, both hemispheres 8.2
                                  2277 Male, age 76, both hemispheres 8.0
                                  Motor trigeminal nucleus
                                  nTPM: 9.1
                                  2560 Male, age 74, both hemispheres 10.1
                                  2321 Female, age 91, both hemispheres 9.6
                                  2079 Male, age 80, both hemispheres 9.1
                                  2309 Male, age 76, both hemispheres 8.7
                                  2335 Male, age 61, both hemispheres 8.0
                                  Nuclei of the trapezoid body
                                  nTPM: 9.8
                                  1983 Male, age 76, both hemispheres 10.7
                                  2159 Male, age 61, both hemispheres 10.2
                                  2735 Female, age 85, both hemispheres 10.1
                                  2368 Female, age 91, both hemispheres 9.6
                                  2166 Male, age 80, both hemispheres 8.3
                                  Nucleus ambiguus
                                  nTPM: 7.3
                                  2071 Male, age 76, both hemispheres 8.3
                                  2096 Female, age 85, both hemispheres 6.3
                                  Nucleus cuneatus
                                  nTPM: 9.4
                                  2808 Female, age 85, both hemispheres 10.0
                                  2805 Female, age 91, both hemispheres 9.9
                                  2380 Male, age 80, both hemispheres 9.5
                                  2562 Male, age 61, both hemispheres 9.4
                                  2131 Male, age 76, both hemispheres 9.3
                                  2100 Male, age 76, both hemispheres 9.2
                                  2381 Male, age 80, both hemispheres 9.2
                                  2564 Male, age 74, both hemispheres 9.2
                                  2376 Male, age 61, both hemispheres 8.6
                                  Nucleus gracilis
                                  nTPM: 8.8
                                  2627 Male, age 74, both hemispheres 9.4
                                  2299 Female, age 85, both hemispheres 8.7
                                  2382 Male, age 80, both hemispheres 8.4
                                  Nucleus raphe magnus
                                  nTPM: 9.6
                                  2160 Male, age 61, both hemispheres 11.2
                                  2459 Female, age 91, both hemispheres 10.0
                                  2051 Male, age 76, both hemispheres 9.6
                                  2172 Female, age 85, both hemispheres 9.4
                                  2455 Male, age 74, both hemispheres 9.0
                                  2328 Male, age 80, both hemispheres 8.7
                                  Nucleus raphe obscurus
                                  nTPM: 8.8
                                  2845 Female, age 85, midline 9.9
                                  2800 Male, age 61, midline 8.8
                                  2142 Male, age 76, midline 7.5
                                  Nucleus raphe pallidus
                                  nTPM: 10.4
                                  2183 Male, age 80, midline 13.1
                                  2145 Male, age 76, midline 9.8
                                  1924 Male, age 61, midline 8.4
                                  Nucleus tractus solitarii
                                  nTPM: 9.0
                                  2144 Female, age 91, right hemisphere 11.2
                                  2656 Male, age 76, both hemispheres 9.0
                                  2307 Male, age 80, both hemispheres 8.3
                                  2191 Female, age 85, both hemispheres 7.7
                                  Paramedian reticular nucleus
                                  nTPM: 10.8
                                  2313 Male, age 61, both hemispheres 12.6
                                  2052 Male, age 76, both hemispheres 11.0
                                  2050 Female, age 85, both hemispheres 10.4
                                  2057 Male, age 80, both hemispheres 9.2
                                  Parvicellular reticular nuclei
                                  nTPM: 9.3
                                  2095 Male, age 76, both hemispheres 9.6
                                  2119 Male, age 80, both hemispheres 9.3
                                  2558 Male, age 74, both hemispheres 9.0
                                  Parvicellular reticular nuclei, medullary
                                  nTPM: 8.4
                                  2189 Female, age 91, both hemispheres 8.5
                                  2091 Female, age 85, both hemispheres 8.3
                                  2181 Male, age 80, left hemisphere 8.3
                                  Pedunculopontine tegmental nucleus
                                  nTPM: 9.0
                                  2334 Male, age 80, both hemispheres 9.4
                                  2338 Male, age 61, both hemispheres 9.0
                                  1921 Female, age 85, both hemispheres 8.4
                                  Peritrigeminal nucleus
                                  nTPM: 9.0
                                  2136 Male, age 76, both hemispheres 9.6
                                  2179 Male, age 61, both hemispheres 9.2
                                  2067 Female, age 85, both hemispheres 8.2
                                  Pontine nuclei
                                  nTPM: 10.1
                                  2727 Male, age 61, right hemisphere 12.4
                                  1968 Male, age 76, left hemisphere 10.6
                                  2454 Male, age 74, left hemisphere 10.6
                                  1863 Male, age 55, unknown 10.3
                                  2109 Female, age 72, unknown 10.0
                                  2319 Female, age 91, both hemispheres 9.8
                                  2787 Female, age 85, both hemispheres 8.9
                                  2115 Male, age 80, left hemisphere 8.6
                                  Pontine raphe nucleus
                                  nTPM: 11.1
                                  2853 Male, age 76, midline 11.7
                                  2122 Female, age 85, midline 10.4
                                  Posteroventral cochlear nucleus
                                  nTPM: 9.1
                                  2341 Male, age 80, both hemispheres 10.0
                                  2371 Male, age 61, both hemispheres 9.7
                                  2135 Female, age 91, both hemispheres 9.1
                                  2752 Female, age 85, both hemispheres 8.5
                                  2070 Male, age 76, both hemispheres 8.3
                                  Prepositus hypoglossal nucleus
                                  nTPM: 8.5
                                  2855 Female, age 85, right hemisphere 9.4
                                  2086 Male, age 80, both hemispheres 7.6
                                  Principal sensory trigeminal nucleus
                                  nTPM: 9.3
                                  2008 Male, age 80, left hemisphere 9.8
                                  2158 Male, age 61, both hemispheres 9.7
                                  2367 Female, age 91, left hemisphere 9.5
                                  2324 Male, age 76, both hemispheres 8.3
                                  Reticular pontine nucleus, caudal
                                  nTPM: 9.3
                                  2559 Male, age 74, both hemispheres 10.5
                                  2457 Female, age 91, both hemispheres 9.6
                                  2092 Male, age 76, both hemispheres 8.7
                                  2332 Male, age 80, right hemisphere 8.6
                                  Reticular pontine nucleus, oral
                                  nTPM: 9.2
                                  1939 Male, age 80, both hemispheres 9.7
                                  2012 Female, age 85, both hemispheres 9.7
                                  2167 Male, age 76, both hemispheres 9.3
                                  2366 Female, age 91, both hemispheres 8.7
                                  2361 Male, age 74, both hemispheres 8.6
                                  Reticulotegmental nucleus
                                  nTPM: 10.2
                                  2452 Male, age 74, both hemispheres 11.1
                                  2325 Male, age 76, both hemispheres 10.7
                                  2322 Female, age 91, both hemispheres 9.6
                                  2333 Male, age 80, both hemispheres 9.5
                                  Spinal trigeminal nucleus, caudal
                                  nTPM: 8.5
                                  2390 Female, age 91, both hemispheres 9.5
                                  2447 Male, age 76, both hemispheres 9.2
                                  2308 Male, age 80, both hemispheres 8.1
                                  2642 Male, age 74, both hemispheres 8.0
                                  2312 Male, age 61, both hemispheres 7.9
                                  Spinal trigeminal nucleus, interpolar
                                  nTPM: 9.3
                                  2066 Male, age 76, right hemisphere 10.2
                                  2033 Male, age 80, both hemispheres 9.5
                                  2625 Male, age 61, both hemispheres 9.4
                                  2386 Female, age 85, both hemispheres 8.9
                                  2389 Female, age 91, both hemispheres 8.3
                                  Spinal trigeminal nucleus, oral
                                  nTPM: 8.5
                                  2164 Male, age 80, both hemispheres 9.6
                                  2737 Female, age 85, both hemispheres 8.2
                                  1978 Male, age 76, both hemispheres 7.7
                                  Spinal vestibular nucleus
                                  nTPM: 8.5
                                  2796 Male, age 61, both hemispheres 9.9
                                  2384 Male, age 74, both hemispheres 9.8
                                  2186 Female, age 91, both hemispheres 8.2
                                  2806 Female, age 85, both hemispheres 8.1
                                  2780 Male, age 80, both hemispheres 7.9
                                  2748 Male, age 76, both hemispheres 7.3
                                  Subcoeruleus area
                                  nTPM: 9.4
                                  2451 Male, age 74, both hemispheres 10.0
                                  2369 Female, age 85, left hemisphere 9.6
                                  2089 Male, age 76, left hemisphere 9.3
                                  2323 Female, age 91, left hemisphere 9.2
                                  1958 Male, age 80, both hemispheres 9.1
                                  Superior olive
                                  nTPM: 8.9
                                  1875 Female, age 85, both hemispheres 9.4
                                  2020 Male, age 76, both hemispheres 9.3
                                  2561 Female, age 91, both hemispheres 8.7
                                  2329 Male, age 80, right hemisphere 8.5
                                  2364 Male, age 74, right hemisphere 8.5
                                  Superior vestibular nucleus
                                  nTPM: 8.1
                                  2383 Male, age 74, both hemispheres 8.2
                                  2015 Male, age 80, both hemispheres 8.1
                                  2061 Male, age 76, both hemispheres 8.1
                                  Ventral medullary reticular nucleus
                                  nTPM: 8.6
                                  2372 Male, age 61, both hemispheres 9.5
                                  2060 Male, age 76, both hemispheres 7.6
                                  Ventral periolivary nuclei
                                  nTPM: 9.8
                                  2023 Male, age 76, both hemispheres 11.0
                                  2794 Female, age 91, left hemisphere 9.8
                                  2165 Male, age 80, both hemispheres 9.7
                                  2130 Female, age 85, both hemispheres 8.6
                                  Ventrolateral medulla, A1-C1 cell groups
                                  nTPM: 9.1
                                  2741 Female, age 85, both hemispheres 10.0
                                  2118 Male, age 80, both hemispheres 9.1
                                  2180 Male, age 61, both hemispheres 9.0
                                  1986 Male, age 76, both hemispheres 8.8
                                  2302 Female, age 91, both hemispheres 8.6
                                  Ventrolateral tegmental area, A5 NE cell group
                                  nTPM: 9.4
                                  1959 Male, age 76, both hemispheres 10.0
                                  2161 Male, age 80, both hemispheres 9.9
                                  2456 Female, age 91, both hemispheres 9.8
                                  2840 Female, age 85, both hemispheres 9.5
                                  2449 Male, age 74, both hemispheres 9.1
                                  2359 Male, age 61, both hemispheres 8.4

                                  PONS AND MEDULLA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 27.6
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Locus coeruleus
                                  Scaled Tags Per Million: 26.2
                                  FF:10182-103D2 60 years, female 26.5
                                  FF:10165-103B3 76 years, female 25.9
                                  Medulla oblongata
                                  Scaled Tags Per Million: 25.8
                                  FF:10174-103C3 60 years, female 30.1
                                  FF:10155-103A2 76 years, female 24.0
                                  FF:10038-101F2 18-64 years, mixed 23.2
                                  Pons
                                  Scaled Tags Per Million: 27.6
                                  FF:10033-101E6 18-54 years, mixed 27.6

                                  PONS AND MEDULLA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 13.1
                                  Pig sample Sample description nTPM
                                  11.813.013.710.113.9012345678910111213
                                  11.813.013.710.113.9012345678910111213
                                  Medulla oblongata
                                  nTPM: 12.5
                                  Samples: 4

                                  Max nTPM: 13.9
                                  Min nTPM: 10.1
                                  Sample A Female 13.9
                                  Sample B Female 10.1
                                  Sample C Male 12.4
                                  Sample D Male 13.6
                                  12.513.113.811.414.802468101214
                                  12.513.113.811.414.802468101214
                                  Pons
                                  nTPM: 13.1
                                  Samples: 4

                                  Max nTPM: 14.8
                                  Min nTPM: 11.4
                                  Sample A Female 14.8
                                  Sample B Female 11.4
                                  Sample C Male 13.4
                                  Sample D Male 12.8

                                  PONS AND MEDULLA - Mouse RNA-seqi

                                  RNA-seq data obtained from mouse brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 17.6
                                  Mouse sample Sample description nTPM
                                  17.217.417.816.917.4024681012141618
                                  17.217.417.816.917.4024681012141618
                                  Pons and medulla
                                  nTPM: 17.6
                                  Samples: 4

                                  Max nTPM: 18.8
                                  Min nTPM: 16.9
                                  Sample A Male 17.3
                                  Sample B Male 16.9
                                  Sample C Female 17.4
                                  Sample D Female 18.8

                                  PONS AND MEDULLA - Allen Mouse ISHi

                                  In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

                                  Max Expression energy 0.5
                                  Allen experiment id Experiment description Expression energy
                                  Medulla oblongata
                                  Expression energy: 0.5
                                  73635419 Antisense, RP_051130_02_E08, Mouse strain C57BL/6J (56 days, male) 0.5
                                  Pons
                                  Expression energy: 0.5
                                  73635419 Antisense, RP_051130_02_E08, Mouse strain C57BL/6J (56 days, male) 0.5

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