HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.9 nTPM
HPA Brain:31.9 nTPM
GTEx:16.9 nTPM
FANTOM5:8.7 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:21.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049060
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1911 Female, age 85, right hemisphere 30.7
2148 Female, age 91, left hemisphere 26.2
1855 Male, age 76, left hemisphere 25.7
2621 Female, age 67, right hemisphere 25.4
1898 Male, age 80, left hemisphere 24.6
2529 Female, age 94, left hemisphere 24.4
Dentate gyrus
nTPM: 30.0
2246 Female, age 85, both hemispheres 33.9
2010 Male, age 76, both hemispheres 32.5
1927 Female, age 91, both hemispheres 29.8
2530 Female, age 94, left hemisphere 29.2
2528 Male, age 74, both hemispheres 28.5
2531 Female, age 67, both hemispheres 25.9
Entorhinal gyrus
nTPM: 27.3
2613 Female, age 94, left hemisphere 33.1
1787 Male, age 76, left hemisphere 30.8
1938 Female, age 85, left hemisphere 29.3
2764 Male, age 80, right hemisphere 28.0
2686 Male, age 75, right hemisphere 21.7
2117 Female, age 91, right hemisphere 20.9
Hippocampus, CA1
nTPM: 27.6
2749 Male, age 80, left hemisphere 29.9
2527 Male, age 74, both hemispheres 28.4
2082 Female, age 91, right hemisphere 27.9
2045 Male, age 76, both hemispheres 27.4
1873 Female, age 85, both hemispheres 24.6
Hippocampus, CA2
nTPM: 27.8
2249 Male, age 74, both hemispheres 31.2
1940 Female, age 85, left hemisphere 30.5
1892 Male, age 76, both hemispheres 29.2
2113 Female, age 91, right hemisphere 28.0
2437 Female, age 94, left hemisphere 25.9
1963 Male, age 80, left hemisphere 21.9
Hippocampus, CA3
nTPM: 27.3
1867 Male, age 76, both hemispheres 33.7
2137 Male, age 80, left hemisphere 30.9
2436 Male, age 74, both hemispheres 28.7
1891 Female, age 85, both hemispheres 25.3
2620 Female, age 94, left hemisphere 23.7
2861 Female, age 67, both hemispheres 21.2
Parahippocampal cortex
nTPM: 30.5
2250 Female, age 67, right hemisphere 34.3
1933 Female, age 85, both hemispheres 34.0
1850 Male, age 80, both hemispheres 31.8
2693 Female, age 94, both hemispheres 31.6
1990 Female, age 91, right hemisphere 30.4
2245 Female, age 91, both hemispheres 30.1
2018 Male, age 76, both hemispheres 29.7
2532 Female, age 72, left hemisphere 29.1
2692 Male, age 74, both hemispheres 27.7
2622 Female, age 67, right hemisphere 26.7
Perirhinal gyrus
nTPM: 31.9
2521 Female, age 94, right hemisphere 35.0
2848 Male, age 76, right hemisphere 33.1
1794 Male, age 80, right hemisphere 31.6
1847 Female, age 91, left hemisphere 30.7
1841 Female, age 85, right hemisphere 29.3
Subiculum
nTPM: 28.4
1977 Female, age 85, both hemispheres 30.8
2438 Female, age 94, left hemisphere 29.7
1901 Male, age 80, both hemispheres 29.0
2619 Male, age 74, both hemispheres 28.5
2729 Female, age 91, right hemisphere 28.3
2042 Male, age 76, both hemispheres 23.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 31.2
Min nTPM: 8.0
Std nTPM: 3.6
Median nTPM: 16.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 31.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 25.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 24.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 23.6
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 23.5
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 23.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 23.5
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 23.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.7
FF:10153-102I9 76 years, female 12.2
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.4
Samples: 4

Max nTPM: 29.1
Min nTPM: 19.7
Sample A Female 29.1
Sample B Female 24.5
Sample C Male 19.7
Sample D Male 20.4
Dorsal hippocampus
nTPM: 28.3
Samples: 4

Max nTPM: 36.5
Min nTPM: 19.5
Sample A Female 36.5
Sample B Female 24.6
Sample C Male 32.5
Sample D Male 19.5
Entorhinal cortex
nTPM: 26.3
Samples: 4

Max nTPM: 33.9
Min nTPM: 20.5
Sample A Female 24.1
Sample B Female 33.9
Sample C Male 26.7
Sample D Male 20.5
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 22.7
Sample A Female 27.8
Sample B Female 22.7
Sample C Male 27.4
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 20.3
Min nTPM: 18.7
Sample A Male 20.3
Sample B Male 19.5
Sample C Female 20.0
Sample D Female 18.7
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 22.5
Min nTPM: 20.0
Sample A Male 22.5
Sample B Male 20.4
Sample C Female 21.0
Sample D Female 20.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69116775 Antisense, RP_050321_01_B06, Mouse strain C57BL/6J (56 days, male) 0.0

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