HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.9 nTPM
HPA Brain:40.0 nTPM
GTEx:16.9 nTPM
FANTOM5:15.6 Scaled Tags Per Million
Pig:34.3 nTPM
Mouse:55.7 nTPM
Allen mouse:6.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046795
Glial cells Medium
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.0
Sample id Sample description nTPM
Hippocampus
nTPM: 34.7
2148 Female, age 91, left hemisphere 37.5
1898 Male, age 80, left hemisphere 36.8
1911 Female, age 85, right hemisphere 36.4
2621 Female, age 67, right hemisphere 34.1
1855 Male, age 76, left hemisphere 32.0
2529 Female, age 94, left hemisphere 31.7
Dentate gyrus
nTPM: 38.2
1927 Female, age 91, both hemispheres 47.8
2531 Female, age 67, both hemispheres 46.0
2010 Male, age 76, both hemispheres 35.5
2528 Male, age 74, both hemispheres 33.9
2246 Female, age 85, both hemispheres 33.3
2530 Female, age 94, left hemisphere 32.6
Entorhinal gyrus
nTPM: 32.5
2117 Female, age 91, right hemisphere 36.8
1938 Female, age 85, left hemisphere 34.8
2764 Male, age 80, right hemisphere 34.4
1787 Male, age 76, left hemisphere 33.0
2686 Male, age 75, right hemisphere 28.8
2613 Female, age 94, left hemisphere 27.0
Hippocampus, CA1
nTPM: 40.0
2045 Male, age 76, both hemispheres 54.9
2749 Male, age 80, left hemisphere 45.2
1873 Female, age 85, both hemispheres 44.2
2527 Male, age 74, both hemispheres 30.5
2082 Female, age 91, right hemisphere 25.4
Hippocampus, CA2
nTPM: 32.4
1963 Male, age 80, left hemisphere 41.0
1892 Male, age 76, both hemispheres 36.8
1940 Female, age 85, left hemisphere 31.2
2249 Male, age 74, both hemispheres 30.7
2113 Female, age 91, right hemisphere 27.5
2437 Female, age 94, left hemisphere 27.3
Hippocampus, CA3
nTPM: 37.0
1891 Female, age 85, both hemispheres 41.3
2620 Female, age 94, left hemisphere 41.3
1867 Male, age 76, both hemispheres 38.9
2137 Male, age 80, left hemisphere 37.8
2861 Female, age 67, both hemispheres 35.3
2436 Male, age 74, both hemispheres 27.4
Parahippocampal cortex
nTPM: 30.8
1850 Male, age 80, both hemispheres 37.0
1933 Female, age 85, both hemispheres 35.1
1990 Female, age 91, right hemisphere 34.6
2532 Female, age 72, left hemisphere 33.4
2693 Female, age 94, both hemispheres 30.4
2245 Female, age 91, both hemispheres 30.0
2018 Male, age 76, both hemispheres 29.1
2692 Male, age 74, both hemispheres 27.7
2250 Female, age 67, right hemisphere 27.2
2622 Female, age 67, right hemisphere 23.5
Perirhinal gyrus
nTPM: 35.1
1841 Female, age 85, right hemisphere 37.8
1794 Male, age 80, right hemisphere 36.8
2848 Male, age 76, right hemisphere 35.9
2521 Female, age 94, right hemisphere 32.9
1847 Female, age 91, left hemisphere 32.2
Subiculum
nTPM: 32.1
1901 Male, age 80, both hemispheres 36.6
1977 Female, age 85, both hemispheres 35.5
2729 Female, age 91, right hemisphere 34.3
2042 Male, age 76, both hemispheres 31.1
2438 Female, age 94, left hemisphere 27.5
2619 Male, age 74, both hemispheres 27.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 36.3
Min nTPM: 6.2
Std nTPM: 4.7
Median nTPM: 16.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 36.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 36.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 33.5
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 31.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 29.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 29.0
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 28.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 28.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 26.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.6
FF:10169-103B7 60 years, female 21.8
FF:10153-102I9 76 years, female 9.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.3
Pig sample Sample description nTPM
Subiculum
nTPM: 25.6
Samples: 4

Max nTPM: 31.9
Min nTPM: 22.6
Sample A Female 31.9
Sample B Female 25.3
Sample C Male 22.7
Sample D Male 22.6
Dorsal hippocampus
nTPM: 34.3
Samples: 4

Max nTPM: 40.9
Min nTPM: 27.6
Sample A Female 40.9
Sample B Female 32.5
Sample C Male 36.1
Sample D Male 27.6
Entorhinal cortex
nTPM: 29.1
Samples: 4

Max nTPM: 33.0
Min nTPM: 27.3
Sample A Female 28.1
Sample B Female 33.0
Sample C Male 27.3
Sample D Male 28.1
Ventral hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 31.2
Min nTPM: 26.2
Sample A Female 30.8
Sample B Female 26.2
Sample C Male 31.2
Sample D Male 30.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.7
Samples: 4

Max nTPM: 59.4
Min nTPM: 51.6
Sample A Male 59.4
Sample B Male 56.2
Sample C Female 51.6
Sample D Female 55.4
Hippocampal formation
nTPM: 52.4
Samples: 4

Max nTPM: 61.7
Min nTPM: 45.6
Sample A Male 47.7
Sample B Male 54.6
Sample C Female 61.7
Sample D Female 45.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.9
75831719 Antisense, RP_060601_02_A04, Mouse strain C57BL/6J (56 days, male) 6.9

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