HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:175.3 nTPM
HPA Brain:85.7 nTPM
GTEx:175.3 nTPM
FANTOM5:128.0 Scaled Tags Per Million
Pig:19.9 nTPM
Mouse:740.3 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 85.7
Sample id Sample description nTPM
Hippocampus
nTPM: 69.8
1898 Male, age 80, left hemisphere 119.5
2621 Female, age 67, right hemisphere 67.1
1855 Male, age 76, left hemisphere 61.9
2148 Female, age 91, left hemisphere 58.7
1911 Female, age 85, right hemisphere 57.1
2529 Female, age 94, left hemisphere 54.7
Dentate gyrus
nTPM: 67.3
1927 Female, age 91, both hemispheres 98.4
2010 Male, age 76, both hemispheres 83.0
2528 Male, age 74, both hemispheres 69.7
2530 Female, age 94, left hemisphere 62.1
2246 Female, age 85, both hemispheres 50.7
2531 Female, age 67, both hemispheres 40.2
Entorhinal gyrus
nTPM: 61.5
2764 Male, age 80, right hemisphere 75.8
1938 Female, age 85, left hemisphere 74.4
1787 Male, age 76, left hemisphere 59.8
2613 Female, age 94, left hemisphere 55.1
2117 Female, age 91, right hemisphere 54.7
2686 Male, age 75, right hemisphere 49.1
Hippocampus, CA1
nTPM: 85.7
2749 Male, age 80, left hemisphere 145.2
1873 Female, age 85, both hemispheres 83.5
2527 Male, age 74, both hemispheres 68.9
2045 Male, age 76, both hemispheres 67.9
2082 Female, age 91, right hemisphere 63.2
Hippocampus, CA2
nTPM: 82.9
2249 Male, age 74, both hemispheres 116.4
1892 Male, age 76, both hemispheres 106.9
1963 Male, age 80, left hemisphere 102.1
2113 Female, age 91, right hemisphere 58.0
1940 Female, age 85, left hemisphere 57.2
2437 Female, age 94, left hemisphere 56.8
Hippocampus, CA3
nTPM: 77.7
2436 Male, age 74, both hemispheres 130.8
1867 Male, age 76, both hemispheres 90.2
2137 Male, age 80, left hemisphere 89.2
1891 Female, age 85, both hemispheres 66.6
2620 Female, age 94, left hemisphere 46.6
2861 Female, age 67, both hemispheres 42.9
Parahippocampal cortex
nTPM: 62.1
1850 Male, age 80, both hemispheres 87.9
1990 Female, age 91, right hemisphere 78.6
1933 Female, age 85, both hemispheres 76.2
2250 Female, age 67, right hemisphere 72.1
2018 Male, age 76, both hemispheres 67.7
2245 Female, age 91, both hemispheres 55.0
2693 Female, age 94, both hemispheres 52.9
2692 Male, age 74, both hemispheres 46.9
2532 Female, age 72, left hemisphere 45.2
2622 Female, age 67, right hemisphere 38.6
Perirhinal gyrus
nTPM: 77.1
1847 Female, age 91, left hemisphere 109.6
1794 Male, age 80, right hemisphere 82.0
1841 Female, age 85, right hemisphere 80.5
2521 Female, age 94, right hemisphere 60.2
2848 Male, age 76, right hemisphere 53.1
Subiculum
nTPM: 59.8
1901 Male, age 80, both hemispheres 80.5
1977 Female, age 85, both hemispheres 71.3
2042 Male, age 76, both hemispheres 62.2
2729 Female, age 91, right hemisphere 59.5
2619 Male, age 74, both hemispheres 51.0
2438 Female, age 94, left hemisphere 34.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 175.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 175.3
Samples: 197

Max nTPM: 446.3
Min nTPM: 69.2
Std nTPM: 65.5
Median nTPM: 161.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 446.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 379.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 330.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 319.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 315.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 314.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 311.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 295.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 292.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 290.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 290.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 128.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 128.0
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 110.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.8
Sample A Female 19.8
Sample B Female 16.0
Sample C Male 17.1
Sample D Male 14.8
Dorsal hippocampus
nTPM: 19.9
Samples: 4

Max nTPM: 24.0
Min nTPM: 16.9
Sample A Female 24.0
Sample B Female 18.6
Sample C Male 20.2
Sample D Male 16.9
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 16.7
Sample A Female 17.3
Sample B Female 19.6
Sample C Male 17.4
Sample D Male 16.7
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 21.0
Min nTPM: 16.3
Sample A Female 21.0
Sample B Female 16.3
Sample C Male 20.5
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 740.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 690.7
Samples: 4

Max nTPM: 715.1
Min nTPM: 668.9
Sample A Male 676.8
Sample B Male 715.1
Sample C Female 701.9
Sample D Female 668.9
Hippocampal formation
nTPM: 740.3
Samples: 4

Max nTPM: 785.6
Min nTPM: 698.6
Sample A Male 785.6
Sample B Male 698.6
Sample C Female 719.0
Sample D Female 757.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
69526970 Antisense, RP_050421_02_A07, Mouse strain C57BL/6J (56 days, male) 13.5

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