HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:40.7 nTPM
HPA Brain:181.2 nTPM
GTEx:40.7 nTPM
FANTOM5:115.7 Scaled Tags Per Million
Pig:107.8 nTPM
Mouse:29.9 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051397Antibody HPA054819
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 181.2
Sample id Sample description nTPM
Hippocampus
nTPM: 173.5
2621 Female, age 67, right hemisphere 213.4
1898 Male, age 80, left hemisphere 178.7
1855 Male, age 76, left hemisphere 176.3
2148 Female, age 91, left hemisphere 173.0
2529 Female, age 94, left hemisphere 152.2
1911 Female, age 85, right hemisphere 147.5
Dentate gyrus
nTPM: 170.5
2531 Female, age 67, both hemispheres 187.3
2530 Female, age 94, left hemisphere 178.5
2246 Female, age 85, both hemispheres 173.4
1927 Female, age 91, both hemispheres 169.8
2010 Male, age 76, both hemispheres 165.6
2528 Male, age 74, both hemispheres 148.4
Entorhinal gyrus
nTPM: 170.6
2613 Female, age 94, left hemisphere 210.9
2764 Male, age 80, right hemisphere 179.9
1938 Female, age 85, left hemisphere 172.3
1787 Male, age 76, left hemisphere 166.6
2686 Male, age 75, right hemisphere 155.2
2117 Female, age 91, right hemisphere 138.9
Hippocampus, CA1
nTPM: 177.1
2749 Male, age 80, left hemisphere 237.7
1873 Female, age 85, both hemispheres 181.4
2527 Male, age 74, both hemispheres 167.6
2045 Male, age 76, both hemispheres 153.0
2082 Female, age 91, right hemisphere 145.6
Hippocampus, CA2
nTPM: 160.2
1963 Male, age 80, left hemisphere 195.6
1892 Male, age 76, both hemispheres 190.2
1940 Female, age 85, left hemisphere 154.1
2437 Female, age 94, left hemisphere 153.3
2113 Female, age 91, right hemisphere 137.5
2249 Male, age 74, both hemispheres 130.6
Hippocampus, CA3
nTPM: 181.2
2861 Female, age 67, both hemispheres 221.2
2620 Female, age 94, left hemisphere 204.1
2137 Male, age 80, left hemisphere 189.9
2436 Male, age 74, both hemispheres 160.4
1867 Male, age 76, both hemispheres 159.2
1891 Female, age 85, both hemispheres 152.3
Parahippocampal cortex
nTPM: 170.1
2245 Female, age 91, both hemispheres 200.2
2622 Female, age 67, right hemisphere 185.8
2532 Female, age 72, left hemisphere 181.2
2692 Male, age 74, both hemispheres 168.0
1850 Male, age 80, both hemispheres 167.6
1933 Female, age 85, both hemispheres 167.2
2693 Female, age 94, both hemispheres 166.7
2250 Female, age 67, right hemisphere 161.7
1990 Female, age 91, right hemisphere 155.8
2018 Male, age 76, both hemispheres 146.9
Perirhinal gyrus
nTPM: 170.7
1847 Female, age 91, left hemisphere 181.6
1794 Male, age 80, right hemisphere 174.9
2521 Female, age 94, right hemisphere 171.1
2848 Male, age 76, right hemisphere 170.4
1841 Female, age 85, right hemisphere 155.4
Subiculum
nTPM: 165.4
2438 Female, age 94, left hemisphere 220.2
2619 Male, age 74, both hemispheres 168.0
1977 Female, age 85, both hemispheres 161.3
1901 Male, age 80, both hemispheres 156.4
2042 Male, age 76, both hemispheres 148.2
2729 Female, age 91, right hemisphere 138.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.7
Samples: 197

Max nTPM: 71.6
Min nTPM: 20.0
Std nTPM: 9.8
Median nTPM: 38.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 71.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 70.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 70.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 66.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 65.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 64.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 63.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 63.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 61.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 57.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.7
FF:10153-102I9 76 years, female 120.3
FF:10169-103B7 60 years, female 111.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.8
Pig sample Sample description nTPM
Subiculum
nTPM: 107.3
Samples: 4

Max nTPM: 132.2
Min nTPM: 94.4
Sample A Female 132.2
Sample B Female 94.4
Sample C Male 106.9
Sample D Male 95.8
Dorsal hippocampus
nTPM: 103.5
Samples: 4

Max nTPM: 127.4
Min nTPM: 76.7
Sample A Female 127.4
Sample B Female 110.8
Sample C Male 99.2
Sample D Male 76.7
Entorhinal cortex
nTPM: 106.7
Samples: 4

Max nTPM: 122.5
Min nTPM: 92.2
Sample A Female 122.5
Sample B Female 92.2
Sample C Male 107.7
Sample D Male 104.2
Ventral hippocampus
nTPM: 107.8
Samples: 4

Max nTPM: 133.9
Min nTPM: 72.8
Sample A Female 112.2
Sample B Female 72.8
Sample C Male 133.9
Sample D Male 112.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.9
Samples: 4

Max nTPM: 37.5
Min nTPM: 27.0
Sample A Male 27.7
Sample B Male 27.0
Sample C Female 27.4
Sample D Female 37.5
Hippocampal formation
nTPM: 28.1
Samples: 4

Max nTPM: 32.2
Min nTPM: 23.5
Sample A Male 23.5
Sample B Male 31.4
Sample C Female 32.2
Sample D Female 25.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68666894 Antisense, RP_050201_01_B11, Mouse strain C57BL/6J (56 days, male) 4.0

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