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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1083.8
nTPM
Monaco:
4065.1
nTPM
Schmiedel:
1493.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1083.8
HPA sample
nTPM
gdT-cell nTPM: 651.4
Samples: 6
Max nTPM: 1069.0
Min nTPM: 230.4
P10809_1007
230.4
P10809_1022
1069.0
P10809_1041
850.3
P10809_1060
841.0
P10809_1077
483.2
P10809_1098
434.2
MAIT T-cell nTPM: 485.0
Samples: 6
Max nTPM: 654.2
Min nTPM: 255.7
P10809_1006
255.7
P10809_1024
651.7
P10809_1043
580.4
P10809_1062
654.2
P10809_1083
361.5
P10809_1097
406.6
Memory CD4 T-cell nTPM: 742.6
Samples: 6
Max nTPM: 920.7
Min nTPM: 453.4
P10809_1014
453.4
P10809_1026
911.3
P10809_1045
879.8
P10809_1064
920.7
P10809_1086
583.5
P10809_1113
707.0
Memory CD8 T-cell nTPM: 641.4
Samples: 5
Max nTPM: 835.1
Min nTPM: 367.7
P10809_1012
367.7
P10809_1027
775.1
P10809_1046
716.9
P10809_1065
835.1
P10809_1111
512.4
Naive CD4 T-cell nTPM: 688.2
Samples: 6
Max nTPM: 852.9
Min nTPM: 380.6
P10809_1015
380.6
P10809_1030
847.3
P10809_1049
796.6
P10809_1068
852.9
P10809_1085
570.9
P10809_1112
681.1
Naive CD8 T-cell nTPM: 645.0
Samples: 6
Max nTPM: 879.9
Min nTPM: 381.4
P10809_1016
381.4
P10809_1031
879.9
P10809_1050
652.1
P10809_1069
838.0
P10809_1087
475.7
P10809_1110
642.9
T-reg nTPM: 1083.8
Samples: 6
Max nTPM: 1255.8
Min nTPM: 632.1
P10809_1018
632.1
P10809_1037
1255.8
P10809_1056
1242.6
P10809_1075
1193.7
P10809_1094
1010.1
P10809_1106
1168.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4065.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3710.6
Samples: 4
Max nTPM: 4632.8
Min nTPM: 2817.6
RHH5202_R3573
4632.8
RHH5230_R3602
4028.8
RHH5259_R3631
2817.6
RHH5288_R3660
3363.1
Effector memory CD8 T-cell nTPM: 3480.6
Samples: 4
Max nTPM: 3732.8
Min nTPM: 3201.0
RHH5203_R3574
3732.8
RHH5231_R3603
3201.0
RHH5260_R3632
3516.9
RHH5289_R3661
3471.5
MAIT T-cell nTPM: 4065.1
Samples: 4
Max nTPM: 6556.2
Min nTPM: 2773.2
RHH5233_R3605
3546.7
RHH5205_R3576
6556.2
RHH5262_R3634
3384.3
RHH5297_R3663
2773.2
Memory CD4 T-cell TFH nTPM: 2859.0
Samples: 4
Max nTPM: 3844.1
Min nTPM: 2020.1
RHH5300_R3666
2561.5
RHH5236_R3608
3844.1
RHH5265_R3637
2020.1
RHH5208_R3579
3010.2
Memory CD4 T-cell Th1 nTPM: 2956.7
Samples: 4
Max nTPM: 3243.5
Min nTPM: 2619.6
RHH5210_R3581
3116.5
RHH5302_R3668
2847.2
RHH5238_R3610
2619.6
RHH5267_R3639
3243.5
Memory CD4 T-cell Th1/Th17 nTPM: 4031.9
Samples: 4
Max nTPM: 4877.2
Min nTPM: 3088.8
RHH5303_R3669
4492.1
RHH5211_R3582
4877.2
RHH5239_R3611
3088.8
RHH5268_R3640
3669.5
Memory CD4 T-cell Th17 nTPM: 3761.1
Samples: 4
Max nTPM: 4089.8
Min nTPM: 3328.6
RHH5304_R3670
3801.4
RHH5212_R3583
4089.8
RHH5240_R3612
3824.7
RHH5269_R3641
3328.6
Memory CD4 T-cell Th2 nTPM: 3735.0
Samples: 4
Max nTPM: 4467.4
Min nTPM: 3244.6
RHH5305_R3671
3595.4
RHH5213_R3584
4467.4
RHH5241_R3613
3632.5
RHH5270_R3642
3244.6
Naive CD4 T-cell nTPM: 2392.6
Samples: 4
Max nTPM: 3097.4
Min nTPM: 1899.8
RHH5306_R3672
2407.2
RHH5214_R3585
3097.4
RHH5242_R3614
2165.9
RHH5271_R3643
1899.8
Naive CD8 T-cell nTPM: 2915.0
Samples: 4
Max nTPM: 3704.7
Min nTPM: 2341.9
RHH5201_R3572
3704.7
RHH5229_R3601
2929.7
RHH5258_R3630
2341.9
RHH5287_R3659
2683.6
Non-Vd2 gdTCR nTPM: 3281.4
Samples: 4
Max nTPM: 4137.0
Min nTPM: 2400.3
RHH5235_R3607
3710.8
RHH5264_R3636
2877.4
RHH5207_R3578
4137.0
RHH5299_R3665
2400.3
T-reg nTPM: 3250.0
Samples: 4
Max nTPM: 4440.8
Min nTPM: 2625.0
RHH5301_R3667
2625.0
RHH5237_R3609
4440.8
RHH5266_R3638
2735.4
RHH5209_R3580
3198.8
Terminal effector memory CD4 T-cell nTPM: 2847.2
Samples: 2
Max nTPM: 2971.5
Min nTPM: 2722.8
RHH5243_R3615
2971.5
RHH5272_R3644
2722.8
Terminal effector memory CD8 T-cell nTPM: 3077.9
Samples: 4
Max nTPM: 3664.0
Min nTPM: 2795.7
RHH5232_R3604
2983.2
RHH5204_R3575
2795.7
RHH5261_R3633
3664.0
RHH5296_R3662
2868.6
Vd2 gdTCR nTPM: 3537.6
Samples: 4
Max nTPM: 4255.6
Min nTPM: 2541.1
RHH5234_R3606
3795.4
RHH5206_R3577
4255.6
RHH5263_R3635
3558.1
RHH5298_R3664
2541.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.