PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:166.4 nTPM
FANTOM5:110.0 Scaled Tags Per Million
Pig:50.8 nTPM
Mouse:12.6 nTPM
Allen mouse:3.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 166.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 136.8
2301 Female, age 85, both hemispheres 171.8
2090 Male, age 80, both hemispheres 158.5
2188 Female, age 91, both hemispheres 146.5
1984 Male, age 76, both hemispheres 70.3
Area postrema
nTPM: 50.5
2306 Male, age 80, both hemispheres 68.5
2054 Male, age 76, both hemispheres 47.0
2799 Male, age 61, both hemispheres 36.0
Dorsal cochlear nucleus
nTPM: 95.1
2187 Female, age 91, both hemispheres 161.3
2802 Male, age 74, right hemisphere 107.5
2378 Male, age 80, both hemispheres 77.1
2370 Male, age 61, both hemispheres 66.8
2058 Male, age 76, both hemispheres 62.8
Dorsal medullary reticular nucleus
nTPM: 94.6
2040 Female, age 85, both hemispheres 107.2
2373 Male, age 61, both hemispheres 90.4
2088 Male, age 76, both hemispheres 86.4
Dorsal motor vagal complex
nTPM: 59.3
2844 Male, age 55, unknown 76.9
2000 Male, age 74, unknown 74.6
2185 Male, age 76, both hemispheres 67.3
2133 Female, age 91, both hemispheres 67.1
2807 Female, age 85, both hemispheres 56.7
2813 Female, age 72, unknown 52.5
2643 Male, age 74, both hemispheres 40.2
2797 Male, age 61, both hemispheres 39.3
Dorsal tegmental nucleus
nTPM: 89.8
2083 Male, age 80, both hemispheres 119.9
2326 Male, age 74, both hemispheres 110.9
1936 Male, age 76, left hemisphere 73.7
2358 Male, age 61, both hemispheres 54.8
Dorsolateral tegmental area
nTPM: 97.0
2751 Female, age 85, both hemispheres 152.6
2654 Male, age 80, both hemispheres 103.9
2337 Male, age 61, both hemispheres 96.2
2360 Male, age 74, both hemispheres 70.6
2141 Male, age 76, both hemispheres 61.8
Gigantocellular reticular nuclei, medullary
nTPM: 94.9
2314 Male, age 61, both hemispheres 159.0
1876 Female, age 85, both hemispheres 117.0
2387 Female, age 91, both hemispheres 106.4
2310 Male, age 80, both hemispheres 87.6
2022 Male, age 76, right hemisphere 51.4
2462 Male, age 74, both hemispheres 47.8
Gigantocellular reticular nuclei, pars
nTPM: 92.3
2336 Male, age 61, both hemispheres 103.1
2084 Female, age 85, both hemispheres 101.7
2706 Male, age 80, both hemispheres 88.7
2330 Male, age 80, both hemispheres 86.6
2168 Male, age 76, both hemispheres 81.3
Inferior olive
nTPM: 118.1
2563 Male, age 74, both hemispheres 138.3
2178 Male, age 61, both hemispheres 129.5
2085 Female, age 85, both hemispheres 119.8
2628 Female, age 91, both hemispheres 103.8
2379 Male, age 80, both hemispheres 98.8
Kolliker-Fuse nucleus
nTPM: 94.3
2793 Female, age 91, left hemisphere 136.0
2163 Male, age 80, both hemispheres 93.1
2315 Male, age 76, right hemisphere 53.9
Lateral lemniscal nuclei
nTPM: 97.7
2320 Female, age 91, left hemisphere 119.5
2746 Female, age 85, left hemisphere 115.0
2036 Male, age 80, both hemispheres 86.8
2453 Male, age 74, right hemisphere 86.8
2169 Male, age 76, both hemispheres 80.3
Lateral medullary reticular nucleus
nTPM: 125.6
2305 Male, age 74, both hemispheres 202.8
2852 Male, age 80, both hemispheres 149.0
2190 Female, age 85, both hemispheres 128.8
2374 Male, age 61, both hemispheres 110.8
2804 Female, age 91, both hemispheres 90.7
2044 Male, age 76, both hemispheres 71.7
Lateral parabrachial nucleus
nTPM: 94.9
2013 Male, age 80, both hemispheres 108.9
2790 Male, age 61, both hemispheres 96.4
2792 Male, age 76, both hemispheres 94.2
2139 Female, age 85, right hemisphere 80.0
Lateral vestibular nucleus
nTPM: 112.4
2311 Male, age 80, both hemispheres 129.3
2184 Male, age 76, both hemispheres 95.4
Locus coeruleus
nTPM: 84.2
2720 Male, age 74, both hemispheres 97.0
2014 Male, age 55, unknown 96.2
2162 Male, age 80, both hemispheres 86.5
2123 Female, age 91, both hemispheres 84.3
1980 Male, age 76, both hemispheres 79.1
2317 Female, age 72, unknown 75.7
2788 Male, age 74, unknown 70.9
Medial olivary nucleus
nTPM: 135.6
1962 Male, age 76, both hemispheres 164.5
1943 Male, age 61, both hemispheres 158.8
2138 Female, age 91, both hemispheres 120.9
2851 Male, age 80, both hemispheres 98.3
Medial parabrachial nucleus
nTPM: 125.1
2170 Female, age 91, both hemispheres 202.4
2463 Female, age 85, right hemisphere 138.1
2854 Male, age 80, both hemispheres 105.2
2786 Male, age 76, both hemispheres 90.8
2156 Male, age 61, both hemispheres 88.9
Medial periolivary nuclei
nTPM: 96.9
2081 Male, age 80, both hemispheres 128.1
2791 Male, age 74, right hemisphere 107.9
2458 Female, age 91, both hemispheres 105.7
2063 Male, age 76, both hemispheres 77.1
2171 Female, age 85, both hemispheres 65.8
Medial vestibular nucleus
nTPM: 107.3
2801 Male, age 74, both hemispheres 177.7
2093 Male, age 80, both hemispheres 107.3
2803 Female, age 91, both hemispheres 106.1
2743 Female, age 85, both hemispheres 99.1
2624 Male, age 61, both hemispheres 88.7
2134 Male, age 76, both hemispheres 64.7
Motor facial nucleus
nTPM: 94.5
2126 Male, age 61, both hemispheres 129.5
2365 Male, age 74, right hemisphere 110.6
2697 Female, age 85, both hemispheres 99.5
2795 Female, age 91, both hemispheres 82.3
2062 Male, age 76, both hemispheres 73.6
2327 Male, age 80, both hemispheres 71.2
Motor hypoglossal nucleus
nTPM: 97.4
2125 Female, age 91, both hemispheres 129.2
2182 Male, age 80, both hemispheres 128.7
2132 Female, age 85, both hemispheres 110.6
2461 Male, age 61, both hemispheres 65.5
2277 Male, age 76, both hemispheres 53.2
Motor trigeminal nucleus
nTPM: 102.2
2321 Female, age 91, both hemispheres 132.9
2560 Male, age 74, both hemispheres 124.6
2079 Male, age 80, both hemispheres 90.7
2335 Male, age 61, both hemispheres 83.1
2309 Male, age 76, both hemispheres 80.0
Nuclei of the trapezoid body
nTPM: 85.7
2166 Male, age 80, both hemispheres 108.0
2368 Female, age 91, both hemispheres 97.2
2159 Male, age 61, both hemispheres 90.8
1983 Male, age 76, both hemispheres 72.5
2735 Female, age 85, both hemispheres 60.3
Nucleus ambiguus
nTPM: 124.0
2071 Male, age 76, both hemispheres 130.5
2096 Female, age 85, both hemispheres 117.5
Nucleus cuneatus
nTPM: 110.8
2808 Female, age 85, both hemispheres 147.7
2380 Male, age 80, both hemispheres 133.4
2381 Male, age 80, both hemispheres 124.1
2100 Male, age 76, both hemispheres 122.5
2564 Male, age 74, both hemispheres 117.2
2376 Male, age 61, both hemispheres 114.9
2131 Male, age 76, both hemispheres 91.6
2805 Female, age 91, both hemispheres 86.2
2562 Male, age 61, both hemispheres 59.7
Nucleus gracilis
nTPM: 107.4
2382 Male, age 80, both hemispheres 125.0
2627 Male, age 74, both hemispheres 111.4
2299 Female, age 85, both hemispheres 85.8
Nucleus raphe magnus
nTPM: 78.0
2459 Female, age 91, both hemispheres 110.8
2455 Male, age 74, both hemispheres 87.5
2051 Male, age 76, both hemispheres 80.9
2328 Male, age 80, both hemispheres 80.2
2160 Male, age 61, both hemispheres 59.0
2172 Female, age 85, both hemispheres 49.5
Nucleus raphe obscurus
nTPM: 166.4
2845 Female, age 85, midline 214.7
2142 Male, age 76, midline 146.1
2800 Male, age 61, midline 138.5
Nucleus raphe pallidus
nTPM: 138.7
2145 Male, age 76, midline 163.9
1924 Male, age 61, midline 126.4
2183 Male, age 80, midline 125.8
Nucleus tractus solitarii
nTPM: 45.9
2656 Male, age 76, both hemispheres 60.2
2307 Male, age 80, both hemispheres 43.2
2191 Female, age 85, both hemispheres 41.4
2144 Female, age 91, right hemisphere 38.7
Paramedian reticular nucleus
nTPM: 95.1
2057 Male, age 80, both hemispheres 109.8
2050 Female, age 85, both hemispheres 95.5
2052 Male, age 76, both hemispheres 93.3
2313 Male, age 61, both hemispheres 81.6
Parvicellular reticular nuclei
nTPM: 112.1
2119 Male, age 80, both hemispheres 128.9
2095 Male, age 76, both hemispheres 123.6
2558 Male, age 74, both hemispheres 83.6
Parvicellular reticular nuclei, medullary
nTPM: 88.6
2189 Female, age 91, both hemispheres 105.7
2091 Female, age 85, both hemispheres 91.5
2181 Male, age 80, left hemisphere 68.6
Pedunculopontine tegmental nucleus
nTPM: 88.6
2334 Male, age 80, both hemispheres 95.4
2338 Male, age 61, both hemispheres 85.7
1921 Female, age 85, both hemispheres 84.6
Peritrigeminal nucleus
nTPM: 104.6
2067 Female, age 85, both hemispheres 124.4
2179 Male, age 61, both hemispheres 98.6
2136 Male, age 76, both hemispheres 90.6
Pontine nuclei
nTPM: 111.6
2454 Male, age 74, left hemisphere 155.8
2109 Female, age 72, unknown 147.0
2319 Female, age 91, both hemispheres 138.2
2115 Male, age 80, left hemisphere 119.5
1863 Male, age 55, unknown 99.0
1968 Male, age 76, left hemisphere 90.7
2787 Female, age 85, both hemispheres 72.4
2727 Male, age 61, right hemisphere 69.8
Pontine raphe nucleus
nTPM: 73.9
2122 Female, age 85, midline 74.6
2853 Male, age 76, midline 73.3
Posteroventral cochlear nucleus
nTPM: 114.7
2135 Female, age 91, both hemispheres 173.6
2341 Male, age 80, both hemispheres 155.0
2371 Male, age 61, both hemispheres 87.6
2070 Male, age 76, both hemispheres 81.4
2752 Female, age 85, both hemispheres 75.8
Prepositus hypoglossal nucleus
nTPM: 118.9
2855 Female, age 85, right hemisphere 182.5
2086 Male, age 80, both hemispheres 55.3
Principal sensory trigeminal nucleus
nTPM: 94.6
2367 Female, age 91, left hemisphere 143.7
2008 Male, age 80, left hemisphere 82.8
2324 Male, age 76, both hemispheres 79.3
2158 Male, age 61, both hemispheres 72.7
Reticular pontine nucleus, caudal
nTPM: 115.0
2559 Male, age 74, both hemispheres 175.1
2457 Female, age 91, both hemispheres 122.1
2092 Male, age 76, both hemispheres 92.8
2332 Male, age 80, right hemisphere 70.0
Reticular pontine nucleus, oral
nTPM: 113.2
2361 Male, age 74, both hemispheres 151.0
2366 Female, age 91, both hemispheres 112.0
1939 Male, age 80, both hemispheres 109.1
2012 Female, age 85, both hemispheres 103.2
2167 Male, age 76, both hemispheres 90.6
Reticulotegmental nucleus
nTPM: 97.7
2322 Female, age 91, both hemispheres 129.5
2452 Male, age 74, both hemispheres 105.9
2325 Male, age 76, both hemispheres 77.8
2333 Male, age 80, both hemispheres 77.7
Spinal trigeminal nucleus, caudal
nTPM: 97.4
2312 Male, age 61, both hemispheres 119.3
2308 Male, age 80, both hemispheres 102.3
2447 Male, age 76, both hemispheres 97.1
2390 Female, age 91, both hemispheres 95.5
2642 Male, age 74, both hemispheres 72.6
Spinal trigeminal nucleus, interpolar
nTPM: 77.0
2033 Male, age 80, both hemispheres 83.8
2389 Female, age 91, both hemispheres 81.7
2386 Female, age 85, both hemispheres 77.4
2625 Male, age 61, both hemispheres 76.3
2066 Male, age 76, right hemisphere 66.1
Spinal trigeminal nucleus, oral
nTPM: 81.5
2164 Male, age 80, both hemispheres 107.0
2737 Female, age 85, both hemispheres 74.0
1978 Male, age 76, both hemispheres 63.5
Spinal vestibular nucleus
nTPM: 99.9
2384 Male, age 74, both hemispheres 145.8
2806 Female, age 85, both hemispheres 112.0
2748 Male, age 76, both hemispheres 98.6
2186 Female, age 91, both hemispheres 95.7
2780 Male, age 80, both hemispheres 88.1
2796 Male, age 61, both hemispheres 59.4
Subcoeruleus area
nTPM: 100.6
2369 Female, age 85, left hemisphere 154.9
2089 Male, age 76, left hemisphere 95.6
1958 Male, age 80, both hemispheres 94.7
2451 Male, age 74, both hemispheres 83.9
2323 Female, age 91, left hemisphere 73.6
Superior olive
nTPM: 105.7
2364 Male, age 74, right hemisphere 122.3
2329 Male, age 80, right hemisphere 107.0
2561 Female, age 91, both hemispheres 104.3
2020 Male, age 76, both hemispheres 103.3
1875 Female, age 85, both hemispheres 91.6
Superior vestibular nucleus
nTPM: 87.7
2015 Male, age 80, both hemispheres 106.7
2383 Male, age 74, both hemispheres 79.8
2061 Male, age 76, both hemispheres 76.7
Ventral medullary reticular nucleus
nTPM: 102.0
2372 Male, age 61, both hemispheres 110.6
2060 Male, age 76, both hemispheres 93.4
Ventral periolivary nuclei
nTPM: 82.5
2023 Male, age 76, both hemispheres 93.1
2794 Female, age 91, left hemisphere 84.6
2165 Male, age 80, both hemispheres 81.4
2130 Female, age 85, both hemispheres 71.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 99.4
2180 Male, age 61, both hemispheres 117.5
2118 Male, age 80, both hemispheres 116.8
2741 Female, age 85, both hemispheres 99.8
2302 Female, age 91, both hemispheres 83.0
1986 Male, age 76, both hemispheres 79.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 97.3
2456 Female, age 91, both hemispheres 112.2
2359 Male, age 61, both hemispheres 105.7
2449 Male, age 74, both hemispheres 94.9
2840 Female, age 85, both hemispheres 92.1
1959 Male, age 76, both hemispheres 90.8
2161 Male, age 80, both hemispheres 88.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 78.6
FF:10182-103D2 60 years, female 92.6
FF:10165-103B3 76 years, female 64.6
Medulla oblongata
Scaled Tags Per Million: 89.7
FF:10038-101F2 18-64 years, mixed 139.3
FF:10155-103A2 76 years, female 68.0
FF:10174-103C3 60 years, female 61.7
Pons
Scaled Tags Per Million: 110.0
FF:10033-101E6 18-54 years, mixed 110.0

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 50.8
Pig sample Sample description nTPM
38.854.566.522.571.9010203040506070
 		Medulla oblongata
nTPM: 50.8
Samples: 4

Max nTPM: 71.9
Min nTPM: 22.5
Sample A Female 64.7
Sample B Female 22.5
Sample C Male 44.2
Sample D Male 71.9
24.631.039.224.244.90510152025303540
 		Pons
nTPM: 32.8
Samples: 4

Max nTPM: 44.9
Min nTPM: 24.2
Sample A Female 44.9
Sample B Female 24.2
Sample C Male 24.7
Sample D Male 37.3

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
12.312.612.812.113.2012345678910111213
 		Pons and medulla
nTPM: 12.6
Samples: 4

Max nTPM: 13.2
Min nTPM: 12.1
Sample A Male 13.2
Sample B Male 12.1
Sample C Female 12.7
Sample D Female 12.4

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.0
71587595 Antisense, RP_050915_04_E10, Mouse strain C57BL/6J (56 days, male) 3.0
73635770 Antisense, RP_050915_04_E10, Mouse strain C57BL/6J (56 days, male) 0.7
Pons
Expression energy: 3.0
71587595 Antisense, RP_050915_04_E10, Mouse strain C57BL/6J (56 days, male) 3.0
73635770 Antisense, RP_050915_04_E10, Mouse strain C57BL/6J (56 days, male) 0.7

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