HIPPOCAMPAL FORMATION - Expression summary
Mouse brain, Intensity
Hippocampal formationi 		154.823
Protein expressioni No data
RNA expressioni
Consensus:72.5 nTPM
HPA Brain:116.4 nTPM
GTEx:72.5 nTPM
FANTOM5:85.5 Scaled Tags Per Million
Pig:110.5 nTPM
Mouse:155.6 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody CAB079051
Hippocampal formation mean intensity 154.823
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 112.643
Molecular layer of the dentate gyrus 105.886
Granular dentate gyrus 28.594
CA1 - oriens layer 126.334
CA1 - pyramidal layer 47.833
CA1 - radiatum layer 104.992
CA2 - oriens layer 137.513
CA2 - pyramidal layer 77.424
CA2 - radiatum layer 124.060
CA3 - oriens layer 136.977
CA3 - pyramidal layer 74.072
CA3 - radiatum layer 125.564
Stratum lucidum 130.770
Lacunosum moleculare 80.204
Subiculum 75.592

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 116.4
Sample id Sample description nTPM
Hippocampus
nTPM: 92.5
1898 Male, age 80, left hemisphere 120.8
2621 Female, age 67, right hemisphere 103.3
1855 Male, age 76, left hemisphere 94.2
2148 Female, age 91, left hemisphere 93.0
2529 Female, age 94, left hemisphere 73.1
1911 Female, age 85, right hemisphere 70.6
Dentate gyrus
nTPM: 94.6
1927 Female, age 91, both hemispheres 115.1
2530 Female, age 94, left hemisphere 106.3
2010 Male, age 76, both hemispheres 96.1
2528 Male, age 74, both hemispheres 84.3
2531 Female, age 67, both hemispheres 84.0
2246 Female, age 85, both hemispheres 81.8
Entorhinal gyrus
nTPM: 95.1
2613 Female, age 94, left hemisphere 114.0
2764 Male, age 80, right hemisphere 112.1
1938 Female, age 85, left hemisphere 102.8
1787 Male, age 76, left hemisphere 93.5
2686 Male, age 75, right hemisphere 82.2
2117 Female, age 91, right hemisphere 65.9
Hippocampus, CA1
nTPM: 105.2
2749 Male, age 80, left hemisphere 173.7
1873 Female, age 85, both hemispheres 96.7
2527 Male, age 74, both hemispheres 91.3
2082 Female, age 91, right hemisphere 88.7
2045 Male, age 76, both hemispheres 75.6
Hippocampus, CA2
nTPM: 102.7
1963 Male, age 80, left hemisphere 134.5
1892 Male, age 76, both hemispheres 131.6
2437 Female, age 94, left hemisphere 92.6
1940 Female, age 85, left hemisphere 88.3
2113 Female, age 91, right hemisphere 88.0
2249 Male, age 74, both hemispheres 81.5
Hippocampus, CA3
nTPM: 101.5
2137 Male, age 80, left hemisphere 140.3
2861 Female, age 67, both hemispheres 110.0
1867 Male, age 76, both hemispheres 104.1
2620 Female, age 94, left hemisphere 95.2
2436 Male, age 74, both hemispheres 86.3
1891 Female, age 85, both hemispheres 72.9
Parahippocampal cortex
nTPM: 94.1
1850 Male, age 80, both hemispheres 120.9
2245 Female, age 91, both hemispheres 102.9
2693 Female, age 94, both hemispheres 102.6
1990 Female, age 91, right hemisphere 96.5
1933 Female, age 85, both hemispheres 95.4
2622 Female, age 67, right hemisphere 87.6
2250 Female, age 67, right hemisphere 85.9
2532 Female, age 72, left hemisphere 85.5
2018 Male, age 76, both hemispheres 83.1
2692 Male, age 74, both hemispheres 80.3
Perirhinal gyrus
nTPM: 116.4
1847 Female, age 91, left hemisphere 138.1
1794 Male, age 80, right hemisphere 119.4
1841 Female, age 85, right hemisphere 114.6
2521 Female, age 94, right hemisphere 110.1
2848 Male, age 76, right hemisphere 100.0
Subiculum
nTPM: 81.0
1901 Male, age 80, both hemispheres 95.7
1977 Female, age 85, both hemispheres 94.6
2619 Male, age 74, both hemispheres 79.6
2438 Female, age 94, left hemisphere 78.4
2042 Male, age 76, both hemispheres 68.8
2729 Female, age 91, right hemisphere 68.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.5
Samples: 197

Max nTPM: 168.1
Min nTPM: 20.8
Std nTPM: 31.8
Median nTPM: 68.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 168.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 151.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 147.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 147.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 139.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 134.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 131.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 130.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 129.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 124.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 124.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.5
FF:10169-103B7 60 years, female 108.0
FF:10153-102I9 76 years, female 63.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 110.5
Pig sample Sample description nTPM
Subiculum
nTPM: 81.8
Samples: 4

Max nTPM: 107.6
Min nTPM: 65.8
Sample A Female 107.6
Sample B Female 76.8
Sample C Male 77.1
Sample D Male 65.8
Dorsal hippocampus
nTPM: 110.5
Samples: 4

Max nTPM: 153.7
Min nTPM: 70.4
Sample A Female 153.7
Sample B Female 120.8
Sample C Male 97.1
Sample D Male 70.4
Entorhinal cortex
nTPM: 86.7
Samples: 4

Max nTPM: 94.5
Min nTPM: 68.4
Sample A Female 94.5
Sample B Female 91.5
Sample C Male 92.2
Sample D Male 68.4
Ventral hippocampus
nTPM: 107.4
Samples: 4

Max nTPM: 127.7
Min nTPM: 67.5
Sample A Female 112.7
Sample B Female 67.5
Sample C Male 121.7
Sample D Male 127.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 155.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 145.0
Samples: 4

Max nTPM: 151.8
Min nTPM: 140.5
Sample A Male 145.7
Sample B Male 140.5
Sample C Female 151.8
Sample D Female 142.1
Hippocampal formation
nTPM: 155.6
Samples: 4

Max nTPM: 166.5
Min nTPM: 146.4
Sample A Male 160.7
Sample B Male 148.8
Sample C Female 166.5
Sample D Female 146.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
69080068 Antisense, RP_050324_01_H07, Mouse strain C57BL/6J (56 days, male) 14.2

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