HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:10.1 nTPM
HPA Brain:11.2 nTPM
GTEx:10.1 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Pig:115.5 nTPM
Mouse:25.0 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020357
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
2148 Female, age 91, left hemisphere 13.0
1898 Male, age 80, left hemisphere 12.8
2529 Female, age 94, left hemisphere 11.3
1911 Female, age 85, right hemisphere 10.3
2621 Female, age 67, right hemisphere 10.2
1855 Male, age 76, left hemisphere 9.6
Dentate gyrus
nTPM: 9.8
2528 Male, age 74, both hemispheres 12.4
2530 Female, age 94, left hemisphere 11.0
1927 Female, age 91, both hemispheres 9.7
2531 Female, age 67, both hemispheres 9.6
2010 Male, age 76, both hemispheres 8.3
2246 Female, age 85, both hemispheres 7.8
Entorhinal gyrus
nTPM: 10.2
2764 Male, age 80, right hemisphere 12.6
2117 Female, age 91, right hemisphere 12.5
2686 Male, age 75, right hemisphere 9.8
2613 Female, age 94, left hemisphere 9.0
1787 Male, age 76, left hemisphere 8.7
1938 Female, age 85, left hemisphere 8.7
Hippocampus, CA1
nTPM: 9.8
1873 Female, age 85, both hemispheres 11.5
2045 Male, age 76, both hemispheres 10.4
2082 Female, age 91, right hemisphere 9.7
2527 Male, age 74, both hemispheres 9.4
2749 Male, age 80, left hemisphere 7.8
Hippocampus, CA2
nTPM: 9.0
2249 Male, age 74, both hemispheres 11.5
1963 Male, age 80, left hemisphere 9.8
2437 Female, age 94, left hemisphere 9.5
2113 Female, age 91, right hemisphere 9.0
1940 Female, age 85, left hemisphere 8.0
1892 Male, age 76, both hemispheres 6.5
Hippocampus, CA3
nTPM: 9.3
2861 Female, age 67, both hemispheres 10.9
2620 Female, age 94, left hemisphere 9.7
1891 Female, age 85, both hemispheres 9.4
2436 Male, age 74, both hemispheres 9.4
1867 Male, age 76, both hemispheres 8.5
2137 Male, age 80, left hemisphere 8.2
Parahippocampal cortex
nTPM: 8.7
2622 Female, age 67, right hemisphere 10.0
1933 Female, age 85, both hemispheres 9.7
2018 Male, age 76, both hemispheres 9.5
2532 Female, age 72, left hemisphere 9.3
1850 Male, age 80, both hemispheres 8.7
1990 Female, age 91, right hemisphere 8.7
2692 Male, age 74, both hemispheres 8.4
2245 Female, age 91, both hemispheres 8.3
2693 Female, age 94, both hemispheres 7.8
2250 Female, age 67, right hemisphere 6.7
Perirhinal gyrus
nTPM: 9.4
2848 Male, age 76, right hemisphere 12.1
1841 Female, age 85, right hemisphere 10.5
1794 Male, age 80, right hemisphere 9.6
1847 Female, age 91, left hemisphere 9.2
2521 Female, age 94, right hemisphere 5.4
Subiculum
nTPM: 9.4
2729 Female, age 91, right hemisphere 12.0
2042 Male, age 76, both hemispheres 10.7
2619 Male, age 74, both hemispheres 10.6
1901 Male, age 80, both hemispheres 9.3
1977 Female, age 85, both hemispheres 8.8
2438 Female, age 94, left hemisphere 5.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.1
Samples: 197

Max nTPM: 23.0
Min nTPM: 3.0
Std nTPM: 3.6
Median nTPM: 9.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 23.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 22.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 19.3
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 19.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 17.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 17.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 17.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 16.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 16.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.5
FF:10153-102I9 76 years, female 12.7
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.5
Pig sample Sample description nTPM
Subiculum
nTPM: 102.1
Samples: 4

Max nTPM: 113.9
Min nTPM: 80.2
Sample A Female 110.4
Sample B Female 113.9
Sample C Male 103.9
Sample D Male 80.2
Dorsal hippocampus
nTPM: 108.1
Samples: 4

Max nTPM: 121.3
Min nTPM: 95.6
Sample A Female 121.3
Sample B Female 116.0
Sample C Male 95.6
Sample D Male 99.6
Entorhinal cortex
nTPM: 79.4
Samples: 4

Max nTPM: 98.0
Min nTPM: 57.4
Sample A Female 73.8
Sample B Female 98.0
Sample C Male 88.4
Sample D Male 57.4
Ventral hippocampus
nTPM: 115.5
Samples: 4

Max nTPM: 145.3
Min nTPM: 95.0
Sample A Female 107.7
Sample B Female 113.9
Sample C Male 145.3
Sample D Male 95.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 20.1
Sample C Female 22.5
Sample D Female 25.3
Hippocampal formation
nTPM: 25.0
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.2
Sample A Male 21.2
Sample B Male 24.1
Sample C Female 25.3
Sample D Female 29.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
70743905 Antisense, RP_050725_02_A09, Mouse strain C57BL/6J (56 days, male) 4.4
67792191 Antisense, RP_040920_01_C09, Mouse strain C57BL/6J (56 days, male) 4.1

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