HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:31.2 nTPM
HPA Brain:27.7 nTPM
GTEx:31.2 nTPM
FANTOM5:13.2 Scaled Tags Per Million
Pig:26.9 nTPM
Mouse:24.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035159Antibody HPA035160
Glial cells MediumHigh
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.7
Sample id Sample description nTPM
Hippocampus
nTPM: 25.5
2529 Female, age 94, left hemisphere 27.1
2621 Female, age 67, right hemisphere 27.0
1898 Male, age 80, left hemisphere 26.4
1911 Female, age 85, right hemisphere 25.2
2148 Female, age 91, left hemisphere 24.0
1855 Male, age 76, left hemisphere 23.1
Dentate gyrus
nTPM: 25.4
2531 Female, age 67, both hemispheres 27.7
2530 Female, age 94, left hemisphere 26.7
2246 Female, age 85, both hemispheres 24.8
2010 Male, age 76, both hemispheres 24.7
1927 Female, age 91, both hemispheres 24.4
2528 Male, age 74, both hemispheres 24.1
Entorhinal gyrus
nTPM: 27.5
1938 Female, age 85, left hemisphere 29.9
2764 Male, age 80, right hemisphere 28.9
2117 Female, age 91, right hemisphere 28.1
1787 Male, age 76, left hemisphere 26.7
2613 Female, age 94, left hemisphere 26.4
2686 Male, age 75, right hemisphere 25.3
Hippocampus, CA1
nTPM: 25.8
2749 Male, age 80, left hemisphere 34.5
2527 Male, age 74, both hemispheres 26.8
2082 Female, age 91, right hemisphere 23.7
1873 Female, age 85, both hemispheres 22.1
2045 Male, age 76, both hemispheres 21.9
Hippocampus, CA2
nTPM: 27.7
1963 Male, age 80, left hemisphere 31.8
2437 Female, age 94, left hemisphere 28.8
1892 Male, age 76, both hemispheres 28.3
1940 Female, age 85, left hemisphere 28.1
2249 Male, age 74, both hemispheres 24.8
2113 Female, age 91, right hemisphere 24.0
Hippocampus, CA3
nTPM: 27.7
2137 Male, age 80, left hemisphere 32.9
2620 Female, age 94, left hemisphere 28.9
1891 Female, age 85, both hemispheres 27.1
1867 Male, age 76, both hemispheres 26.2
2861 Female, age 67, both hemispheres 25.8
2436 Male, age 74, both hemispheres 25.3
Parahippocampal cortex
nTPM: 26.6
2692 Male, age 74, both hemispheres 30.7
2622 Female, age 67, right hemisphere 28.8
2245 Female, age 91, both hemispheres 28.0
1933 Female, age 85, both hemispheres 27.1
2018 Male, age 76, both hemispheres 26.1
2250 Female, age 67, right hemisphere 26.0
1850 Male, age 80, both hemispheres 25.4
2693 Female, age 94, both hemispheres 24.8
1990 Female, age 91, right hemisphere 24.7
2532 Female, age 72, left hemisphere 24.3
Perirhinal gyrus
nTPM: 25.4
1794 Male, age 80, right hemisphere 26.4
1841 Female, age 85, right hemisphere 26.2
1847 Female, age 91, left hemisphere 26.0
2848 Male, age 76, right hemisphere 25.0
2521 Female, age 94, right hemisphere 23.4
Subiculum
nTPM: 27.6
2619 Male, age 74, both hemispheres 29.7
1901 Male, age 80, both hemispheres 29.6
2042 Male, age 76, both hemispheres 28.1
2438 Female, age 94, left hemisphere 27.5
1977 Female, age 85, both hemispheres 27.4
2729 Female, age 91, right hemisphere 23.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.2
Samples: 197

Max nTPM: 61.3
Min nTPM: 16.3
Std nTPM: 6.3
Median nTPM: 30.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 61.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 51.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 46.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 46.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 45.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 44.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 43.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 43.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 42.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 42.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.2
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 10.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.9
Pig sample Sample description nTPM
Subiculum
nTPM: 22.6
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.2
Sample A Female 28.2
Sample B Female 20.2
Sample C Male 21.1
Sample D Male 20.8
Dorsal hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 34.3
Min nTPM: 19.8
Sample A Female 34.3
Sample B Female 25.9
Sample C Male 27.5
Sample D Male 19.8
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 26.6
Min nTPM: 21.1
Sample A Female 26.6
Sample B Female 24.4
Sample C Male 23.2
Sample D Male 21.1
Ventral hippocampus
nTPM: 24.6
Samples: 4

Max nTPM: 32.5
Min nTPM: 17.2
Sample A Female 22.3
Sample B Female 17.2
Sample C Male 26.3
Sample D Male 32.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.1
Sample A Male 18.5
Sample B Male 23.3
Sample C Female 21.8
Sample D Female 17.1
Hippocampal formation
nTPM: 24.3
Samples: 4

Max nTPM: 26.7
Min nTPM: 22.6
Sample A Male 23.7
Sample B Male 22.6
Sample C Female 26.7
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
71836831 Antisense, RP_051017_02_B06, Mouse strain C57BL/6J (56 days, male) 4.6
686193 Antisense, RP_040916_01_A01, Mouse strain C57BL/6J (56 days, male) 0.5

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