HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:38.0 nTPM
HPA Brain:22.0 nTPM
GTEx:38.0 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:6.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045792
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 18.1
1855 Male, age 76, left hemisphere 23.1
1898 Male, age 80, left hemisphere 21.8
2621 Female, age 67, right hemisphere 17.9
1911 Female, age 85, right hemisphere 16.3
2148 Female, age 91, left hemisphere 15.4
2529 Female, age 94, left hemisphere 14.0
Dentate gyrus
nTPM: 18.5
2530 Female, age 94, left hemisphere 28.6
2010 Male, age 76, both hemispheres 22.6
1927 Female, age 91, both hemispheres 16.5
2531 Female, age 67, both hemispheres 15.0
2246 Female, age 85, both hemispheres 14.5
2528 Male, age 74, both hemispheres 14.0
Entorhinal gyrus
nTPM: 13.1
2764 Male, age 80, right hemisphere 15.2
2117 Female, age 91, right hemisphere 14.3
2613 Female, age 94, left hemisphere 14.1
2686 Male, age 75, right hemisphere 14.1
1938 Female, age 85, left hemisphere 10.8
1787 Male, age 76, left hemisphere 10.4
Hippocampus, CA1
nTPM: 22.0
2749 Male, age 80, left hemisphere 36.5
1873 Female, age 85, both hemispheres 23.2
2045 Male, age 76, both hemispheres 18.7
2527 Male, age 74, both hemispheres 16.1
2082 Female, age 91, right hemisphere 15.2
Hippocampus, CA2
nTPM: 18.5
1963 Male, age 80, left hemisphere 28.6
1892 Male, age 76, both hemispheres 19.5
2249 Male, age 74, both hemispheres 18.4
2437 Female, age 94, left hemisphere 17.6
2113 Female, age 91, right hemisphere 14.5
1940 Female, age 85, left hemisphere 12.5
Hippocampus, CA3
nTPM: 18.0
2137 Male, age 80, left hemisphere 20.3
2620 Female, age 94, left hemisphere 20.1
1867 Male, age 76, both hemispheres 18.3
2436 Male, age 74, both hemispheres 18.3
2861 Female, age 67, both hemispheres 17.9
1891 Female, age 85, both hemispheres 13.2
Parahippocampal cortex
nTPM: 12.5
2245 Female, age 91, both hemispheres 15.0
2018 Male, age 76, both hemispheres 14.2
1990 Female, age 91, right hemisphere 12.8
1933 Female, age 85, both hemispheres 12.7
2692 Male, age 74, both hemispheres 12.5
2250 Female, age 67, right hemisphere 12.4
2532 Female, age 72, left hemisphere 12.3
2622 Female, age 67, right hemisphere 11.6
1850 Male, age 80, both hemispheres 11.2
2693 Female, age 94, both hemispheres 10.7
Perirhinal gyrus
nTPM: 13.3
1794 Male, age 80, right hemisphere 14.2
2521 Female, age 94, right hemisphere 14.1
1847 Female, age 91, left hemisphere 13.8
2848 Male, age 76, right hemisphere 12.8
1841 Female, age 85, right hemisphere 11.6
Subiculum
nTPM: 15.2
2042 Male, age 76, both hemispheres 20.5
2438 Female, age 94, left hemisphere 17.7
1901 Male, age 80, both hemispheres 16.8
2729 Female, age 91, right hemisphere 13.9
1977 Female, age 85, both hemispheres 11.6
2619 Male, age 74, both hemispheres 10.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.0
Samples: 197

Max nTPM: 102.1
Min nTPM: 12.3
Std nTPM: 15.3
Median nTPM: 35.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 102.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 89.9
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 79.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 76.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 75.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 74.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 72.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 67.5
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 66.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 65.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 62.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10169-103B7 60 years, female 15.5
FF:10153-102I9 76 years, female 12.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Subiculum
nTPM: 8.2
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.2
Sample A Female 8.1
Sample B Female 8.8
Sample C Male 8.5
Sample D Male 7.2
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 14.9
Min nTPM: 9.9
Sample A Female 11.7
Sample B Female 10.7
Sample C Male 14.9
Sample D Male 9.9
Entorhinal cortex
nTPM: 10.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 12.7
Sample C Male 15.2
Sample D Male 7.7
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 16.8
Min nTPM: 7.9
Sample A Female 8.4
Sample B Female 7.9
Sample C Male 16.8
Sample D Male 9.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.6
Sample A Male 7.0
Sample B Male 5.6
Sample C Female 6.8
Sample D Female 5.6
Hippocampal formation
nTPM: 6.0
Samples: 4

Max nTPM: 6.2
Min nTPM: 5.8
Sample A Male 5.8
Sample B Male 6.0
Sample C Female 6.2
Sample D Female 6.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74427086 Antisense, RP_051206_03_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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