HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:32.2 nTPM
HPA Brain:71.6 nTPM
GTEx:32.2 nTPM
FANTOM5:85.6 Scaled Tags Per Million
Pig:31.9 nTPM
Mouse:49.7 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007922
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.6
Sample id Sample description nTPM
Hippocampus
nTPM: 65.8
1898 Male, age 80, left hemisphere 70.6
2621 Female, age 67, right hemisphere 66.4
1911 Female, age 85, right hemisphere 66.2
2148 Female, age 91, left hemisphere 64.2
1855 Male, age 76, left hemisphere 63.9
2529 Female, age 94, left hemisphere 63.8
Dentate gyrus
nTPM: 66.5
2530 Female, age 94, left hemisphere 72.7
2010 Male, age 76, both hemispheres 69.9
2246 Female, age 85, both hemispheres 66.3
1927 Female, age 91, both hemispheres 65.3
2531 Female, age 67, both hemispheres 62.5
2528 Male, age 74, both hemispheres 62.3
Entorhinal gyrus
nTPM: 69.3
2764 Male, age 80, right hemisphere 81.1
2613 Female, age 94, left hemisphere 73.3
1938 Female, age 85, left hemisphere 69.2
1787 Male, age 76, left hemisphere 68.4
2686 Male, age 75, right hemisphere 63.2
2117 Female, age 91, right hemisphere 60.6
Hippocampus, CA1
nTPM: 70.4
2749 Male, age 80, left hemisphere 97.7
1873 Female, age 85, both hemispheres 72.3
2045 Male, age 76, both hemispheres 65.5
2527 Male, age 74, both hemispheres 59.6
2082 Female, age 91, right hemisphere 56.8
Hippocampus, CA2
nTPM: 66.2
1963 Male, age 80, left hemisphere 73.9
2249 Male, age 74, both hemispheres 68.7
1892 Male, age 76, both hemispheres 68.6
1940 Female, age 85, left hemisphere 65.2
2437 Female, age 94, left hemisphere 64.2
2113 Female, age 91, right hemisphere 56.8
Hippocampus, CA3
nTPM: 68.6
2137 Male, age 80, left hemisphere 86.4
2620 Female, age 94, left hemisphere 79.3
1867 Male, age 76, both hemispheres 68.8
1891 Female, age 85, both hemispheres 64.2
2436 Male, age 74, both hemispheres 56.9
2861 Female, age 67, both hemispheres 56.2
Parahippocampal cortex
nTPM: 64.3
1850 Male, age 80, both hemispheres 74.0
2693 Female, age 94, both hemispheres 71.6
1990 Female, age 91, right hemisphere 67.9
1933 Female, age 85, both hemispheres 66.8
2532 Female, age 72, left hemisphere 63.1
2245 Female, age 91, both hemispheres 62.4
2018 Male, age 76, both hemispheres 61.8
2692 Male, age 74, both hemispheres 60.9
2622 Female, age 67, right hemisphere 58.7
2250 Female, age 67, right hemisphere 55.5
Perirhinal gyrus
nTPM: 71.6
1794 Male, age 80, right hemisphere 72.9
2848 Male, age 76, right hemisphere 72.8
1841 Female, age 85, right hemisphere 72.4
1847 Female, age 91, left hemisphere 71.2
2521 Female, age 94, right hemisphere 68.8
Subiculum
nTPM: 70.0
1901 Male, age 80, both hemispheres 76.7
2042 Male, age 76, both hemispheres 76.7
2438 Female, age 94, left hemisphere 71.4
1977 Female, age 85, both hemispheres 70.8
2619 Male, age 74, both hemispheres 63.7
2729 Female, age 91, right hemisphere 60.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.2
Samples: 197

Max nTPM: 51.2
Min nTPM: 20.3
Std nTPM: 5.6
Median nTPM: 32.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 51.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 45.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 44.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 43.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 42.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 42.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 42.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.6
FF:10169-103B7 60 years, female 88.2
FF:10153-102I9 76 years, female 83.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.9
Pig sample Sample description nTPM
Subiculum
nTPM: 29.6
Samples: 4

Max nTPM: 35.1
Min nTPM: 27.3
Sample A Female 35.1
Sample B Female 27.3
Sample C Male 28.5
Sample D Male 27.3
Dorsal hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 37.8
Min nTPM: 25.1
Sample A Female 37.8
Sample B Female 33.7
Sample C Male 31.0
Sample D Male 25.1
Entorhinal cortex
nTPM: 29.6
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.0
Sample A Female 32.1
Sample B Female 31.1
Sample C Male 29.1
Sample D Male 26.0
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 34.0
Min nTPM: 23.9
Sample A Female 31.9
Sample B Female 23.9
Sample C Male 34.0
Sample D Male 32.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.7
Samples: 4

Max nTPM: 52.6
Min nTPM: 45.2
Sample A Male 45.9
Sample B Male 46.9
Sample C Female 45.2
Sample D Female 52.6
Hippocampal formation
nTPM: 49.7
Samples: 4

Max nTPM: 54.7
Min nTPM: 46.9
Sample A Male 47.2
Sample B Male 49.9
Sample C Female 54.7
Sample D Female 46.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
69013708 Antisense, RP_050309_02_G12, Mouse strain C57BL/6J (56 days, male) 5.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org