HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:22.4 nTPM
HPA Brain:24.3 nTPM
GTEx:22.4 nTPM
FANTOM5:52.2 Scaled Tags Per Million
Mouse:44.3 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041178Antibody HPA042041
Glial cells LowMedium
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
1898 Male, age 80, left hemisphere 25.3
1911 Female, age 85, right hemisphere 21.4
2529 Female, age 94, left hemisphere 21.3
1855 Male, age 76, left hemisphere 21.1
2621 Female, age 67, right hemisphere 19.5
2148 Female, age 91, left hemisphere 19.2
Dentate gyrus
nTPM: 21.2
2010 Male, age 76, both hemispheres 25.8
1927 Female, age 91, both hemispheres 23.5
2528 Male, age 74, both hemispheres 22.6
2246 Female, age 85, both hemispheres 19.7
2531 Female, age 67, both hemispheres 18.5
2530 Female, age 94, left hemisphere 17.1
Entorhinal gyrus
nTPM: 19.8
1938 Female, age 85, left hemisphere 22.9
2764 Male, age 80, right hemisphere 20.3
2117 Female, age 91, right hemisphere 20.0
1787 Male, age 76, left hemisphere 19.5
2613 Female, age 94, left hemisphere 18.4
2686 Male, age 75, right hemisphere 18.1
Hippocampus, CA1
nTPM: 22.4
2749 Male, age 80, left hemisphere 24.7
1873 Female, age 85, both hemispheres 24.5
2082 Female, age 91, right hemisphere 22.3
2527 Male, age 74, both hemispheres 21.3
2045 Male, age 76, both hemispheres 19.2
Hippocampus, CA2
nTPM: 22.8
1892 Male, age 76, both hemispheres 25.9
2249 Male, age 74, both hemispheres 25.9
2113 Female, age 91, right hemisphere 22.7
1963 Male, age 80, left hemisphere 21.5
1940 Female, age 85, left hemisphere 21.4
2437 Female, age 94, left hemisphere 19.3
Hippocampus, CA3
nTPM: 20.7
2436 Male, age 74, both hemispheres 25.5
1867 Male, age 76, both hemispheres 23.5
1891 Female, age 85, both hemispheres 22.3
2137 Male, age 80, left hemisphere 22.1
2620 Female, age 94, left hemisphere 15.8
2861 Female, age 67, both hemispheres 14.9
Parahippocampal cortex
nTPM: 21.3
1850 Male, age 80, both hemispheres 25.8
2018 Male, age 76, both hemispheres 24.1
1990 Female, age 91, right hemisphere 23.0
1933 Female, age 85, both hemispheres 21.9
2250 Female, age 67, right hemisphere 21.6
2693 Female, age 94, both hemispheres 21.3
2245 Female, age 91, both hemispheres 21.0
2532 Female, age 72, left hemisphere 19.1
2692 Male, age 74, both hemispheres 18.2
2622 Female, age 67, right hemisphere 17.1
Perirhinal gyrus
nTPM: 24.3
1794 Male, age 80, right hemisphere 27.3
1841 Female, age 85, right hemisphere 27.3
1847 Female, age 91, left hemisphere 25.3
2848 Male, age 76, right hemisphere 21.3
2521 Female, age 94, right hemisphere 20.1
Subiculum
nTPM: 20.9
1901 Male, age 80, both hemispheres 23.3
1977 Female, age 85, both hemispheres 23.3
2042 Male, age 76, both hemispheres 21.3
2729 Female, age 91, right hemisphere 20.7
2619 Male, age 74, both hemispheres 20.3
2438 Female, age 94, left hemisphere 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 30.4
Min nTPM: 14.2
Std nTPM: 3.3
Median nTPM: 22.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 30.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 30.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 29.9
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 29.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 28.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 28.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 27.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.2
FF:10169-103B7 60 years, female 61.2
FF:10153-102I9 76 years, female 43.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.8
Samples: 4

Max nTPM: 48.8
Min nTPM: 38.0
Sample A Male 43.6
Sample B Male 48.8
Sample C Female 44.7
Sample D Female 38.0
Hippocampal formation
nTPM: 44.4
Samples: 4

Max nTPM: 54.1
Min nTPM: 40.2
Sample A Male 54.1
Sample B Male 40.2
Sample C Female 40.3
Sample D Female 42.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
76098392 Antisense, RP_060626_01_G05, Mouse strain C57BL/6J (56 days, male) 4.7

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