HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:101.8 nTPM
HPA Brain:93.4 nTPM
GTEx:101.8 nTPM
FANTOM5:208.7 Scaled Tags Per Million
Pig:0.3 nTPM
Mouse:78.0 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA069290
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.4
Sample id Sample description nTPM
Hippocampus
nTPM: 84.0
1898 Male, age 80, left hemisphere 97.3
2621 Female, age 67, right hemisphere 90.2
2148 Female, age 91, left hemisphere 84.6
2529 Female, age 94, left hemisphere 83.0
1911 Female, age 85, right hemisphere 75.0
1855 Male, age 76, left hemisphere 73.7
Dentate gyrus
nTPM: 82.7
1927 Female, age 91, both hemispheres 97.2
2530 Female, age 94, left hemisphere 92.5
2010 Male, age 76, both hemispheres 83.2
2246 Female, age 85, both hemispheres 75.2
2531 Female, age 67, both hemispheres 73.9
2528 Male, age 74, both hemispheres 73.8
Entorhinal gyrus
nTPM: 79.1
2764 Male, age 80, right hemisphere 91.3
1787 Male, age 76, left hemisphere 83.1
1938 Female, age 85, left hemisphere 81.6
2613 Female, age 94, left hemisphere 77.1
2686 Male, age 75, right hemisphere 72.0
2117 Female, age 91, right hemisphere 69.3
Hippocampus, CA1
nTPM: 87.1
2749 Male, age 80, left hemisphere 123.9
2527 Male, age 74, both hemispheres 85.4
1873 Female, age 85, both hemispheres 82.8
2082 Female, age 91, right hemisphere 72.8
2045 Male, age 76, both hemispheres 70.7
Hippocampus, CA2
nTPM: 86.0
1963 Male, age 80, left hemisphere 101.2
1892 Male, age 76, both hemispheres 89.1
1940 Female, age 85, left hemisphere 88.7
2249 Male, age 74, both hemispheres 86.7
2437 Female, age 94, left hemisphere 75.9
2113 Female, age 91, right hemisphere 74.5
Hippocampus, CA3
nTPM: 85.9
2436 Male, age 74, both hemispheres 96.7
2137 Male, age 80, left hemisphere 95.3
2620 Female, age 94, left hemisphere 92.3
1867 Male, age 76, both hemispheres 79.4
2861 Female, age 67, both hemispheres 76.1
1891 Female, age 85, both hemispheres 75.5
Parahippocampal cortex
nTPM: 81.2
1850 Male, age 80, both hemispheres 93.8
2532 Female, age 72, left hemisphere 87.9
1933 Female, age 85, both hemispheres 85.2
2250 Female, age 67, right hemisphere 85.0
2245 Female, age 91, both hemispheres 80.9
1990 Female, age 91, right hemisphere 80.7
2693 Female, age 94, both hemispheres 75.9
2018 Male, age 76, both hemispheres 75.7
2692 Male, age 74, both hemispheres 75.3
2622 Female, age 67, right hemisphere 72.1
Perirhinal gyrus
nTPM: 93.4
1794 Male, age 80, right hemisphere 101.8
1847 Female, age 91, left hemisphere 101.6
1841 Female, age 85, right hemisphere 96.3
2521 Female, age 94, right hemisphere 90.1
2848 Male, age 76, right hemisphere 77.1
Subiculum
nTPM: 81.7
2438 Female, age 94, left hemisphere 93.7
2619 Male, age 74, both hemispheres 82.6
1901 Male, age 80, both hemispheres 82.4
1977 Female, age 85, both hemispheres 82.3
2042 Male, age 76, both hemispheres 75.9
2729 Female, age 91, right hemisphere 73.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.8
Samples: 197

Max nTPM: 186.8
Min nTPM: 62.2
Std nTPM: 23.5
Median nTPM: 101.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 186.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 179.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 175.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 167.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 166.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 163.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 157.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 155.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 153.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 145.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 144.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 208.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 208.7
FF:10169-103B7 60 years, female 258.6
FF:10153-102I9 76 years, female 158.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.3
Pig sample Sample description nTPM
Subiculum
nTPM: 0.3
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.1
Sample C Male 0.0
Sample D Male 0.9
Dorsal hippocampus
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.3
Entorhinal cortex
nTPM: 0.3
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.1
Sample A Female 0.4
Sample B Female 0.5
Sample C Male 0.1
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.2
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.3
Sample B Female 0.3
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 78.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.0
Samples: 4

Max nTPM: 83.1
Min nTPM: 72.6
Sample A Male 72.6
Sample B Male 80.2
Sample C Female 83.1
Sample D Female 76.1
Hippocampal formation
nTPM: 71.8
Samples: 4

Max nTPM: 82.8
Min nTPM: 66.0
Sample A Male 82.8
Sample B Male 66.9
Sample C Female 66.0
Sample D Female 71.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
70474827 Antisense, RP_050623_01_B01, Mouse strain C57BL/6J (56 days, male) 6.6

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