HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:20.0 nTPM
HPA Brain:37.0 nTPM
GTEx:20.0 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:7.8 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001844Antibody CAB005374Antibody CAB016305
Glial cells Not detectedNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.1
1911 Female, age 85, right hemisphere 39.6
2529 Female, age 94, left hemisphere 39.3
2148 Female, age 91, left hemisphere 36.9
2621 Female, age 67, right hemisphere 36.6
1855 Male, age 76, left hemisphere 33.4
1898 Male, age 80, left hemisphere 30.9
Dentate gyrus
nTPM: 34.6
2528 Male, age 74, both hemispheres 37.9
2530 Female, age 94, left hemisphere 37.2
2531 Female, age 67, both hemispheres 36.5
2246 Female, age 85, both hemispheres 35.4
2010 Male, age 76, both hemispheres 31.1
1927 Female, age 91, both hemispheres 29.6
Entorhinal gyrus
nTPM: 33.7
1787 Male, age 76, left hemisphere 40.3
2686 Male, age 75, right hemisphere 37.7
2117 Female, age 91, right hemisphere 33.9
2613 Female, age 94, left hemisphere 33.8
2764 Male, age 80, right hemisphere 29.4
1938 Female, age 85, left hemisphere 26.9
Hippocampus, CA1
nTPM: 34.5
2082 Female, age 91, right hemisphere 39.2
2527 Male, age 74, both hemispheres 37.8
1873 Female, age 85, both hemispheres 34.2
2749 Male, age 80, left hemisphere 32.7
2045 Male, age 76, both hemispheres 28.4
Hippocampus, CA2
nTPM: 36.8
2249 Male, age 74, both hemispheres 40.8
2113 Female, age 91, right hemisphere 39.1
2437 Female, age 94, left hemisphere 38.4
1940 Female, age 85, left hemisphere 38.1
1963 Male, age 80, left hemisphere 34.6
1892 Male, age 76, both hemispheres 29.8
Hippocampus, CA3
nTPM: 36.2
2436 Male, age 74, both hemispheres 42.4
2861 Female, age 67, both hemispheres 39.0
2137 Male, age 80, left hemisphere 36.5
1891 Female, age 85, both hemispheres 34.9
1867 Male, age 76, both hemispheres 33.6
2620 Female, age 94, left hemisphere 30.6
Parahippocampal cortex
nTPM: 35.2
2532 Female, age 72, left hemisphere 42.0
2692 Male, age 74, both hemispheres 41.0
2622 Female, age 67, right hemisphere 39.7
2245 Female, age 91, both hemispheres 37.5
2250 Female, age 67, right hemisphere 37.5
2018 Male, age 76, both hemispheres 34.1
1990 Female, age 91, right hemisphere 32.2
2693 Female, age 94, both hemispheres 30.1
1850 Male, age 80, both hemispheres 29.2
1933 Female, age 85, both hemispheres 28.6
Perirhinal gyrus
nTPM: 31.3
2521 Female, age 94, right hemisphere 35.1
2848 Male, age 76, right hemisphere 33.4
1847 Female, age 91, left hemisphere 31.8
1794 Male, age 80, right hemisphere 29.0
1841 Female, age 85, right hemisphere 27.0
Subiculum
nTPM: 37.0
2619 Male, age 74, both hemispheres 42.8
2438 Female, age 94, left hemisphere 41.0
2729 Female, age 91, right hemisphere 35.9
2042 Male, age 76, both hemispheres 35.7
1901 Male, age 80, both hemispheres 35.4
1977 Female, age 85, both hemispheres 31.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.0
Samples: 197

Max nTPM: 59.2
Min nTPM: 6.6
Std nTPM: 8.3
Median nTPM: 17.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 59.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 55.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 46.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 44.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 44.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 43.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 42.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 39.4
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 38.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 38.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10153-102I9 76 years, female 26.4
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.1
Pig sample Sample description nTPM
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 14.7
Min nTPM: 7.7
Sample A Female 11.2
Sample B Female 7.7
Sample C Male 10.9
Sample D Male 14.7
Dorsal hippocampus
nTPM: 7.4
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.3
Sample A Female 8.4
Sample B Female 6.7
Sample C Male 8.1
Sample D Male 6.3
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 14.0
Min nTPM: 8.6
Sample A Female 14.0
Sample B Female 9.3
Sample C Male 12.1
Sample D Male 8.6
Ventral hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 13.2
Min nTPM: 7.0
Sample A Female 10.8
Sample B Female 7.2
Sample C Male 13.2
Sample D Male 7.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 8.0
Min nTPM: 7.6
Sample A Male 8.0
Sample B Male 7.7
Sample C Female 8.0
Sample D Female 7.6
Hippocampal formation
nTPM: 6.5
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.9
Sample A Male 7.4
Sample B Male 6.1
Sample C Female 5.9
Sample D Female 6.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74431597 Antisense, RP_060207_02_B10, Mouse strain C57BL/6J (56 days, male) 0.0

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