HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:35.2 nTPM
HPA Brain:27.9 nTPM
GTEx:35.2 nTPM
FANTOM5:8.6 Scaled Tags Per Million
Pig:6.2 nTPM
Mouse:6.0 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
2529 Female, age 94, left hemisphere 31.9
1855 Male, age 76, left hemisphere 30.4
2621 Female, age 67, right hemisphere 26.6
1898 Male, age 80, left hemisphere 23.4
2148 Female, age 91, left hemisphere 22.5
1911 Female, age 85, right hemisphere 21.8
Dentate gyrus
nTPM: 26.4
2530 Female, age 94, left hemisphere 39.0
2010 Male, age 76, both hemispheres 30.4
2531 Female, age 67, both hemispheres 28.1
2246 Female, age 85, both hemispheres 20.9
2528 Male, age 74, both hemispheres 20.8
1927 Female, age 91, both hemispheres 19.2
Entorhinal gyrus
nTPM: 27.9
1787 Male, age 76, left hemisphere 35.9
2686 Male, age 75, right hemisphere 31.7
2117 Female, age 91, right hemisphere 27.8
2764 Male, age 80, right hemisphere 26.8
2613 Female, age 94, left hemisphere 25.4
1938 Female, age 85, left hemisphere 19.5
Hippocampus, CA1
nTPM: 22.9
2045 Male, age 76, both hemispheres 27.9
2082 Female, age 91, right hemisphere 24.7
2527 Male, age 74, both hemispheres 21.4
2749 Male, age 80, left hemisphere 20.6
1873 Female, age 85, both hemispheres 19.9
Hippocampus, CA2
nTPM: 26.3
1963 Male, age 80, left hemisphere 29.9
2437 Female, age 94, left hemisphere 28.1
1940 Female, age 85, left hemisphere 26.5
1892 Male, age 76, both hemispheres 25.9
2249 Male, age 74, both hemispheres 23.8
2113 Female, age 91, right hemisphere 23.4
Hippocampus, CA3
nTPM: 24.9
2861 Female, age 67, both hemispheres 40.9
1867 Male, age 76, both hemispheres 25.6
2137 Male, age 80, left hemisphere 23.3
2436 Male, age 74, both hemispheres 20.9
2620 Female, age 94, left hemisphere 19.6
1891 Female, age 85, both hemispheres 18.9
Parahippocampal cortex
nTPM: 24.8
2622 Female, age 67, right hemisphere 32.6
2532 Female, age 72, left hemisphere 29.1
2245 Female, age 91, both hemispheres 27.8
1990 Female, age 91, right hemisphere 27.5
2018 Male, age 76, both hemispheres 26.7
2250 Female, age 67, right hemisphere 24.9
2692 Male, age 74, both hemispheres 23.2
1933 Female, age 85, both hemispheres 19.7
1850 Male, age 80, both hemispheres 18.6
2693 Female, age 94, both hemispheres 18.0
Perirhinal gyrus
nTPM: 22.3
2848 Male, age 76, right hemisphere 29.5
1794 Male, age 80, right hemisphere 22.7
2521 Female, age 94, right hemisphere 21.3
1847 Female, age 91, left hemisphere 19.6
1841 Female, age 85, right hemisphere 18.2
Subiculum
nTPM: 25.5
2042 Male, age 76, both hemispheres 29.7
2438 Female, age 94, left hemisphere 26.2
2729 Female, age 91, right hemisphere 25.6
2619 Male, age 74, both hemispheres 24.7
1901 Male, age 80, both hemispheres 24.1
1977 Female, age 85, both hemispheres 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 197

Max nTPM: 168.5
Min nTPM: 9.4
Std nTPM: 22.9
Median nTPM: 27.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 168.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 138.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 123.3
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 116.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 112.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 86.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 83.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 76.4
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 74.0
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 73.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 70.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.6
FF:10153-102I9 76 years, female 12.0
FF:10169-103B7 60 years, female 5.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.2
Pig sample Sample description nTPM
Subiculum
nTPM: 5.1
Samples: 4

Max nTPM: 7.5
Min nTPM: 2.6
Sample A Female 5.2
Sample B Female 2.6
Sample C Male 7.5
Sample D Male 5.1
Dorsal hippocampus
nTPM: 3.6
Samples: 4

Max nTPM: 5.5
Min nTPM: 2.4
Sample A Female 3.7
Sample B Female 2.4
Sample C Male 5.5
Sample D Male 2.7
Entorhinal cortex
nTPM: 6.3
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.2
Sample A Female 7.0
Sample B Female 5.2
Sample C Male 7.0
Sample D Male 5.9
Ventral hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 9.6
Min nTPM: 2.9
Sample A Female 4.6
Sample B Female 2.9
Sample C Male 9.6
Sample D Male 3.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 9.4
Min nTPM: 3.4
Sample A Male 7.5
Sample B Male 9.4
Sample C Female 3.8
Sample D Female 3.4
Hippocampal formation
nTPM: 3.5
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.6
Sample A Male 3.4
Sample B Male 3.4
Sample C Female 2.6
Sample D Female 4.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71836849 Antisense, RP_051017_02_C12, Mouse strain C57BL/6J (56 days, male) 0.8
68191408 Antisense, RP_041129_01_B04, Mouse strain C57BL/6J (56 days, male) 0.0

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