We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
187.0
nTPM
Monaco:
117.0
nTPM
Schmiedel:
178.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.0
HPA sample
nTPM
gdT-cell nTPM: 187.0
Samples: 6
Max nTPM: 376.7
Min nTPM: 106.9
P10809_1007
223.3
P10809_1022
149.7
P10809_1041
106.9
P10809_1060
112.3
P10809_1077
376.7
P10809_1098
153.3
MAIT T-cell nTPM: 71.4
Samples: 6
Max nTPM: 157.0
Min nTPM: 46.7
P10809_1006
49.3
P10809_1024
49.4
P10809_1043
46.7
P10809_1062
52.6
P10809_1083
157.0
P10809_1097
73.2
Memory CD4 T-cell nTPM: 137.6
Samples: 6
Max nTPM: 371.3
Min nTPM: 63.0
P10809_1014
125.3
P10809_1026
74.1
P10809_1045
63.0
P10809_1064
126.5
P10809_1086
371.3
P10809_1113
65.6
Memory CD8 T-cell nTPM: 123.6
Samples: 5
Max nTPM: 194.6
Min nTPM: 72.1
P10809_1012
153.5
P10809_1027
123.6
P10809_1046
72.1
P10809_1065
194.6
P10809_1111
74.0
Naive CD4 T-cell nTPM: 76.0
Samples: 6
Max nTPM: 232.1
Min nTPM: 39.6
P10809_1015
55.3
P10809_1030
40.4
P10809_1049
45.1
P10809_1068
39.6
P10809_1085
232.1
P10809_1112
43.7
Naive CD8 T-cell nTPM: 126.2
Samples: 6
Max nTPM: 426.3
Min nTPM: 46.9
P10809_1016
70.3
P10809_1031
61.0
P10809_1050
56.2
P10809_1069
96.2
P10809_1087
426.3
P10809_1110
46.9
T-reg nTPM: 121.7
Samples: 6
Max nTPM: 244.8
Min nTPM: 50.4
P10809_1018
150.6
P10809_1037
50.4
P10809_1056
113.2
P10809_1075
84.1
P10809_1094
244.8
P10809_1106
87.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
117.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 166.1
Min nTPM: 34.7
RHH5202_R3573
166.1
RHH5230_R3602
34.7
RHH5259_R3631
40.8
RHH5288_R3660
80.0
Effector memory CD8 T-cell nTPM: 62.7
Samples: 4
Max nTPM: 85.0
Min nTPM: 42.4
RHH5203_R3574
80.6
RHH5231_R3603
85.0
RHH5260_R3632
42.9
RHH5289_R3661
42.4
MAIT T-cell nTPM: 47.0
Samples: 4
Max nTPM: 56.1
Min nTPM: 31.5
RHH5233_R3605
47.5
RHH5205_R3576
56.1
RHH5262_R3634
31.5
RHH5297_R3663
52.9
Memory CD4 T-cell TFH nTPM: 65.2
Samples: 4
Max nTPM: 86.8
Min nTPM: 41.0
RHH5300_R3666
59.3
RHH5236_R3608
86.8
RHH5265_R3637
41.0
RHH5208_R3579
73.5
Memory CD4 T-cell Th1 nTPM: 57.6
Samples: 4
Max nTPM: 84.2
Min nTPM: 32.6
RHH5210_R3581
84.2
RHH5302_R3668
66.0
RHH5238_R3610
32.6
RHH5267_R3639
47.6
Memory CD4 T-cell Th1/Th17 nTPM: 90.5
Samples: 4
Max nTPM: 170.4
Min nTPM: 20.5
RHH5303_R3669
170.4
RHH5211_R3582
104.8
RHH5239_R3611
20.5
RHH5268_R3640
66.2
Memory CD4 T-cell Th17 nTPM: 93.1
Samples: 4
Max nTPM: 239.2
Min nTPM: 32.3
RHH5304_R3670
62.1
RHH5212_R3583
239.2
RHH5240_R3612
38.6
RHH5269_R3641
32.3
Memory CD4 T-cell Th2 nTPM: 91.3
Samples: 4
Max nTPM: 195.8
Min nTPM: 43.3
RHH5305_R3671
71.7
RHH5213_R3584
195.8
RHH5241_R3613
43.3
RHH5270_R3642
54.2
Naive CD4 T-cell nTPM: 60.0
Samples: 4
Max nTPM: 138.1
Min nTPM: 21.8
RHH5306_R3672
40.9
RHH5214_R3585
138.1
RHH5242_R3614
39.3
RHH5271_R3643
21.8
Naive CD8 T-cell nTPM: 37.7
Samples: 4
Max nTPM: 54.5
Min nTPM: 13.3
RHH5201_R3572
46.4
RHH5229_R3601
13.3
RHH5258_R3630
54.5
RHH5287_R3659
36.4
Non-Vd2 gdTCR nTPM: 117.0
Samples: 4
Max nTPM: 261.6
Min nTPM: 39.9
RHH5235_R3607
39.9
RHH5264_R3636
86.7
RHH5207_R3578
261.6
RHH5299_R3665
79.9
T-reg nTPM: 76.0
Samples: 4
Max nTPM: 133.0
Min nTPM: 40.9
RHH5301_R3667
77.4
RHH5237_R3609
52.5
RHH5266_R3638
40.9
RHH5209_R3580
133.0
Terminal effector memory CD4 T-cell nTPM: 56.7
Samples: 2
Max nTPM: 78.0
Min nTPM: 35.3
RHH5243_R3615
35.3
RHH5272_R3644
78.0
Terminal effector memory CD8 T-cell nTPM: 87.0
Samples: 4
Max nTPM: 141.2
Min nTPM: 51.6
RHH5232_R3604
77.5
RHH5204_R3575
141.2
RHH5261_R3633
51.6
RHH5296_R3662
77.5
Vd2 gdTCR nTPM: 116.6
Samples: 4
Max nTPM: 261.3
Min nTPM: 50.1
RHH5234_R3606
52.5
RHH5206_R3577
261.3
RHH5263_R3635
50.1
RHH5298_R3664
102.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
