We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
LY6E
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • LY6E
IMMUNE CELL MONOCYTES Show tissue menu
B-CELLS DENDRITIC CELLS GRANULOCYTES MONOCYTES NK-CELLS PROGENITORS T-CELLS TOTAL PBMC
Immune cell proteome
Monocytes
MONOCYTES - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA:756.5 nTPM
Monaco:441.3 nTPM
Schmiedel:201.3 TPM

MONOCYTES - Annotated protein expression
Pending normal tissue analysis

MONOCYTES - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM 756.5
HPA sample nTPM
Classical monocyte
nTPM: 125.0
Samples: 6

Max nTPM: 206.9
Min nTPM: 66.5
P10809_1003 68.2
P10809_1020 73.6
P10809_1039 185.7
P10809_1058 66.5
P10809_1080 149.0
P10809_1107 206.9
Intermediate monocyte
nTPM: 567.0
Samples: 6

Max nTPM: 941.3
Min nTPM: 300.6
P10809_1004 568.4
P10809_1023 362.7
P10809_1042 941.3
P10809_1061 300.6
P10809_1081 493.0
P10809_1108 735.8
Non-classical monocyte
nTPM: 756.5
Samples: 5

Max nTPM: 1076.1
Min nTPM: 518.9
P10809_1005 544.0
P10809_1053 937.0
P10809_1072 518.9
P10809_1082 706.6
P10809_1109 1076.1

MONOCYTES - Monaco RNA-seqi

RNA-Seq data generated by Monaco et al is reported as average nTPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max nTPM 441.3
Monaco sample nTPM
Classical monocyte
nTPM: 203.1
Samples: 4

Max nTPM: 469.8
Min nTPM: 53.5
RHH5313_R3680 147.2
RHH5221_R3593 469.8
RHH5250_R3622 53.5
RHH5279_R3651 141.7
Intermediate monocyte
nTPM: 441.3
Samples: 4

Max nTPM: 630.1
Min nTPM: 145.5
RHH5314_R3681 483.5
RHH5222_R3594 630.1
RHH5251_R3623 145.5
RHH5280_R3652 505.9
Non-classical monocyte
nTPM: 384.7
Samples: 4

Max nTPM: 623.2
Min nTPM: 93.1
RHH5315_R3682 371.4
RHH5223_R3595 623.2
RHH5252_R3624 93.1
RHH5281_R3653 451.1

MONOCYTES - Schmiedel RNA-seqi

RNA-Seq data generated by Schmiedel et al is reported as average TPM.

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.

Max TPM 201.3
Schmiedel sample id TPM
Classical monocyte
TPM: 91.6
Samples: 91

Max TPM: 472.5
Min TPM: 19.5
MONOCYTES_1 472.5
MONOCYTES_2 239.6
MONOCYTES_3 233.1
MONOCYTES_4 206.7
MONOCYTES_5 206.4
MONOCYTES_6 196.3
MONOCYTES_7 194.7
MONOCYTES_8 188.1
MONOCYTES_9 184.6
MONOCYTES_10 182.3
MONOCYTES_11 174.3
MONOCYTES_12 167.7
MONOCYTES_13 159.1
MONOCYTES_14 155.3
MONOCYTES_15 148.1
MONOCYTES_16 141.3
MONOCYTES_17 127.2
MONOCYTES_18 127.1
MONOCYTES_19 126.0
MONOCYTES_20 125.2
MONOCYTES_21 125.2
MONOCYTES_22 122.1
MONOCYTES_23 118.7
MONOCYTES_24 116.9
MONOCYTES_25 106.3
MONOCYTES_26 102.1
MONOCYTES_27 101.0
MONOCYTES_28 99.2
MONOCYTES_29 97.4
MONOCYTES_30 96.8
MONOCYTES_31 90.5
MONOCYTES_32 87.9
MONOCYTES_33 83.7
MONOCYTES_34 82.4
MONOCYTES_35 81.3
MONOCYTES_36 80.2
MONOCYTES_37 79.9
MONOCYTES_38 74.7
MONOCYTES_39 74.5
MONOCYTES_40 74.4
MONOCYTES_41 74.0
MONOCYTES_42 73.8
MONOCYTES_43 73.4
MONOCYTES_44 73.1
MONOCYTES_45 73.0
MONOCYTES_46 72.8
MONOCYTES_47 72.6
MONOCYTES_48 72.2
MONOCYTES_49 71.8
MONOCYTES_50 71.7
MONOCYTES_51 69.0
MONOCYTES_52 68.1
MONOCYTES_53 67.3
MONOCYTES_54 64.0
MONOCYTES_55 62.7
MONOCYTES_56 61.0
MONOCYTES_57 60.4
MONOCYTES_58 59.2
MONOCYTES_59 59.1
MONOCYTES_60 58.5
MONOCYTES_61 58.2
MONOCYTES_62 58.1
MONOCYTES_63 57.7
MONOCYTES_64 57.7
MONOCYTES_65 57.0
MONOCYTES_66 54.2
MONOCYTES_67 52.3
MONOCYTES_68 52.1
MONOCYTES_69 51.2
MONOCYTES_70 50.6
MONOCYTES_71 49.8
MONOCYTES_72 45.6
MONOCYTES_73 43.9
MONOCYTES_74 43.8
MONOCYTES_75 43.3
MONOCYTES_76 43.2
MONOCYTES_77 42.7
MONOCYTES_78 42.3
MONOCYTES_79 41.9
MONOCYTES_80 38.7
MONOCYTES_81 38.0
MONOCYTES_82 37.9
MONOCYTES_83 36.5
MONOCYTES_84 35.6
MONOCYTES_85 33.8
MONOCYTES_86 30.9
MONOCYTES_87 30.4
MONOCYTES_88 30.4
MONOCYTES_89 25.4
MONOCYTES_90 22.1
MONOCYTES_91 19.5
Show allShow less
Non-classical monocyte
TPM: 201.3
Samples: 90

Max TPM: 756.5
Min TPM: 25.4
M2_1 756.5
M2_2 516.0
M2_3 424.0
M2_4 412.1
M2_5 393.7
M2_6 377.6
M2_7 375.5
M2_8 370.9
M2_9 349.1
M2_10 338.0
M2_11 337.6
M2_12 295.7
M2_13 285.6
M2_14 276.2
M2_15 273.7
M2_16 273.6
M2_17 272.8
M2_18 270.7
M2_19 269.1
M2_20 268.7
M2_21 267.5
M2_22 256.9
M2_23 256.0
M2_24 245.4
M2_25 243.6
M2_26 231.4
M2_27 224.6
M2_28 222.8
M2_29 220.4
M2_30 218.3
M2_31 217.8
M2_32 217.4
M2_33 215.4
M2_34 214.9
M2_35 214.3
M2_36 214.0
M2_37 211.9
M2_38 209.5
M2_39 208.7
M2_40 205.8
M2_41 205.3
M2_42 202.5
M2_43 200.8
M2_44 200.1
M2_45 189.9
M2_46 180.6
M2_47 174.2
M2_48 173.8
M2_49 168.2
M2_50 166.3
M2_51 162.4
M2_52 160.2
M2_53 156.4
M2_54 154.0
M2_55 152.4
M2_56 152.2
M2_57 147.7
M2_58 147.5
M2_59 146.7
M2_60 145.9
M2_61 141.0
M2_62 141.0
M2_63 139.5
M2_64 137.8
M2_65 137.2
M2_66 137.1
M2_67 134.4
M2_68 133.6
M2_69 133.5
M2_70 130.5
M2_71 128.1
M2_72 125.7
M2_73 124.1
M2_74 121.5
M2_75 113.3
M2_76 109.0
M2_77 100.1
M2_78 98.5
M2_79 96.3
M2_80 91.7
M2_81 89.4
M2_82 81.2
M2_83 74.9
M2_84 74.6
M2_85 69.1
M2_86 69.0
M2_87 53.9
M2_88 34.1
M2_89 33.5
M2_90 25.4
Show allShow less

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org