HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:475.0 nTPM
HPA Brain:184.3 nTPM
GTEx:475.0 nTPM
FANTOM5:209.6 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:561.3 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045095Antibody HPA050165
Glial cells MediumLow
Neuronal cells HighHigh



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 184.3
Sample id Sample description nTPM
Hippocampus
nTPM: 184.3
1898 Male, age 80, left hemisphere 234.8
2529 Female, age 94, left hemisphere 230.4
2621 Female, age 67, right hemisphere 165.5
2148 Female, age 91, left hemisphere 165.3
1911 Female, age 85, right hemisphere 156.7
1855 Male, age 76, left hemisphere 153.5
Dentate gyrus
nTPM: 182.0
2530 Female, age 94, left hemisphere 263.1
2010 Male, age 76, both hemispheres 203.3
2531 Female, age 67, both hemispheres 167.6
2528 Male, age 74, both hemispheres 162.5
2246 Female, age 85, both hemispheres 152.2
1927 Female, age 91, both hemispheres 143.4
Entorhinal gyrus
nTPM: 169.5
2117 Female, age 91, right hemisphere 207.7
2764 Male, age 80, right hemisphere 185.3
1787 Male, age 76, left hemisphere 180.0
2686 Male, age 75, right hemisphere 164.8
1938 Female, age 85, left hemisphere 162.7
2613 Female, age 94, left hemisphere 116.4
Hippocampus, CA1
nTPM: 173.2
2749 Male, age 80, left hemisphere 199.8
2527 Male, age 74, both hemispheres 176.8
2082 Female, age 91, right hemisphere 170.3
1873 Female, age 85, both hemispheres 169.6
2045 Male, age 76, both hemispheres 149.6
Hippocampus, CA2
nTPM: 179.5
1963 Male, age 80, left hemisphere 201.6
2249 Male, age 74, both hemispheres 184.7
2437 Female, age 94, left hemisphere 175.8
1892 Male, age 76, both hemispheres 173.8
1940 Female, age 85, left hemisphere 171.0
2113 Female, age 91, right hemisphere 169.9
Hippocampus, CA3
nTPM: 156.2
1867 Male, age 76, both hemispheres 188.0
2861 Female, age 67, both hemispheres 168.3
1891 Female, age 85, both hemispheres 167.6
2436 Male, age 74, both hemispheres 162.2
2137 Male, age 80, left hemisphere 149.6
2620 Female, age 94, left hemisphere 101.8
Parahippocampal cortex
nTPM: 155.8
2018 Male, age 76, both hemispheres 198.1
2250 Female, age 67, right hemisphere 180.4
2245 Female, age 91, both hemispheres 178.4
2532 Female, age 72, left hemisphere 175.4
1990 Female, age 91, right hemisphere 172.3
1850 Male, age 80, both hemispheres 156.1
1933 Female, age 85, both hemispheres 149.3
2622 Female, age 67, right hemisphere 125.8
2692 Male, age 74, both hemispheres 124.2
2693 Female, age 94, both hemispheres 97.8
Perirhinal gyrus
nTPM: 161.7
1794 Male, age 80, right hemisphere 182.2
1847 Female, age 91, left hemisphere 173.4
2521 Female, age 94, right hemisphere 159.9
1841 Female, age 85, right hemisphere 154.7
2848 Male, age 76, right hemisphere 138.3
Subiculum
nTPM: 166.8
1977 Female, age 85, both hemispheres 208.2
2438 Female, age 94, left hemisphere 178.4
1901 Male, age 80, both hemispheres 165.2
2042 Male, age 76, both hemispheres 164.3
2729 Female, age 91, right hemisphere 142.6
2619 Male, age 74, both hemispheres 142.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 475.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 475.0
Samples: 197

Max nTPM: 1088.7
Min nTPM: 206.0
Std nTPM: 129.5
Median nTPM: 449.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1088.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 967.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 868.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 858.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 847.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 825.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 825.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 793.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 778.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 707.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 705.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 209.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 209.6
FF:10169-103B7 60 years, female 289.7
FF:10153-102I9 76 years, female 129.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.1
Pig sample Sample description nTPM
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.2
Sample C Male 0.2
Sample D Male 0.0
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.1
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 561.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 533.8
Samples: 4

Max nTPM: 554.3
Min nTPM: 499.4
Sample A Male 554.3
Sample B Male 534.5
Sample C Female 546.9
Sample D Female 499.4
Hippocampal formation
nTPM: 561.3
Samples: 4

Max nTPM: 613.3
Min nTPM: 508.1
Sample A Male 592.3
Sample B Male 508.1
Sample C Female 531.4
Sample D Female 613.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
69818338 Antisense, RP_050510_04_H06, Mouse strain C57BL/6J (56 days, male) 12.5
74749928 Antisense, RP_060220_04_F02, Mouse strain C57BL/6J (56 days, male) 12.4

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