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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
242.9
nTPM
FANTOM5:
164.7
Scaled Tags Per Million
Pig:
0.0
nTPM
Allen mouse:
11.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
242.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 218.4
2090
Male, age 80, both hemispheres
250.9
2188
Female, age 91, both hemispheres
227.0
1984
Male, age 76, both hemispheres
200.6
2301
Female, age 85, both hemispheres
195.1
Dorsal cochlear nucleus nTPM: 212.0
2802
Male, age 74, right hemisphere
250.5
2187
Female, age 91, both hemispheres
228.5
2378
Male, age 80, both hemispheres
196.4
2370
Male, age 61, both hemispheres
194.3
2058
Male, age 76, both hemispheres
190.3
Dorsal tegmental nucleus nTPM: 242.9
2358
Male, age 61, both hemispheres
270.0
2326
Male, age 74, both hemispheres
264.5
2083
Male, age 80, both hemispheres
248.1
1936
Male, age 76, left hemisphere
189.1
Dorsolateral tegmental area nTPM: 222.8
2337
Male, age 61, both hemispheres
293.7
2654
Male, age 80, both hemispheres
238.5
2751
Female, age 85, both hemispheres
202.0
2360
Male, age 74, both hemispheres
192.5
2141
Male, age 76, both hemispheres
187.3
Kolliker-Fuse nucleus nTPM: 210.8
2315
Male, age 76, right hemisphere
244.2
2163
Male, age 80, both hemispheres
217.6
2793
Female, age 91, left hemisphere
170.7
Lateral lemniscal nuclei nTPM: 173.0
2169
Male, age 76, both hemispheres
199.4
2746
Female, age 85, left hemisphere
192.0
2320
Female, age 91, left hemisphere
179.8
2453
Male, age 74, right hemisphere
176.1
2036
Male, age 80, both hemispheres
117.8
Lateral parabrachial nucleus nTPM: 201.8
2013
Male, age 80, both hemispheres
233.8
2139
Female, age 85, right hemisphere
217.5
2792
Male, age 76, both hemispheres
183.0
2790
Male, age 61, both hemispheres
172.9
Lateral vestibular nucleus nTPM: 217.1
2311
Male, age 80, both hemispheres
246.6
2184
Male, age 76, both hemispheres
187.7
Locus coeruleus nTPM: 210.1
2123
Female, age 91, both hemispheres
254.5
2317
Female, age 72, unknown
223.6
2162
Male, age 80, both hemispheres
221.0
2014
Male, age 55, unknown
211.5
1980
Male, age 76, both hemispheres
211.4
2720
Male, age 74, both hemispheres
207.3
2788
Male, age 74, unknown
141.2
Medial parabrachial nucleus nTPM: 215.9
2170
Female, age 91, both hemispheres
261.2
2463
Female, age 85, right hemisphere
233.9
2156
Male, age 61, both hemispheres
220.6
2854
Male, age 80, both hemispheres
184.0
2786
Male, age 76, both hemispheres
179.9
Medial periolivary nuclei nTPM: 191.6
2063
Male, age 76, both hemispheres
231.0
2081
Male, age 80, both hemispheres
209.8
2458
Female, age 91, both hemispheres
182.7
2171
Female, age 85, both hemispheres
180.5
2791
Male, age 74, right hemisphere
154.0
Motor facial nucleus nTPM: 181.5
2062
Male, age 76, both hemispheres
222.2
2126
Male, age 61, both hemispheres
206.3
2365
Male, age 74, right hemisphere
183.5
2795
Female, age 91, both hemispheres
175.3
2697
Female, age 85, both hemispheres
153.0
2327
Male, age 80, both hemispheres
148.5
Motor trigeminal nucleus nTPM: 200.0
2335
Male, age 61, both hemispheres
224.9
2560
Male, age 74, both hemispheres
202.1
2321
Female, age 91, both hemispheres
195.5
2309
Male, age 76, both hemispheres
195.1
2079
Male, age 80, both hemispheres
182.4
Nuclei of the trapezoid body nTPM: 192.0
1983
Male, age 76, both hemispheres
252.9
2159
Male, age 61, both hemispheres
197.8
2735
Female, age 85, both hemispheres
179.5
2166
Male, age 80, both hemispheres
176.4
2368
Female, age 91, both hemispheres
153.6
Nucleus raphe magnus nTPM: 188.0
2160
Male, age 61, both hemispheres
209.2
2455
Male, age 74, both hemispheres
197.7
2459
Female, age 91, both hemispheres
181.4
2172
Female, age 85, both hemispheres
181.1
2051
Male, age 76, both hemispheres
180.3
2328
Male, age 80, both hemispheres
178.3
Paramedian reticular nucleus nTPM: 182.7
2057
Male, age 80, both hemispheres
203.2
2313
Male, age 61, both hemispheres
195.1
2050
Female, age 85, both hemispheres
186.0
2052
Male, age 76, both hemispheres
146.7
Pedunculopontine tegmental nucleus nTPM: 222.7
2338
Male, age 61, both hemispheres
250.7
2334
Male, age 80, both hemispheres
239.5
1921
Female, age 85, both hemispheres
177.8
Pontine nuclei nTPM: 223.9
2787
Female, age 85, both hemispheres
257.3
1863
Male, age 55, unknown
250.8
1968
Male, age 76, left hemisphere
233.7
2319
Female, age 91, both hemispheres
223.4
2109
Female, age 72, unknown
218.3
2115
Male, age 80, left hemisphere
208.1
2454
Male, age 74, left hemisphere
206.8
2727
Male, age 61, right hemisphere
193.1
Pontine raphe nucleus nTPM: 186.5
2122
Female, age 85, midline
192.2
2853
Male, age 76, midline
180.7
Posteroventral cochlear nucleus nTPM: 213.8
2135
Female, age 91, both hemispheres
233.7
2341
Male, age 80, both hemispheres
233.6
2752
Female, age 85, both hemispheres
205.0
2371
Male, age 61, both hemispheres
199.4
2070
Male, age 76, both hemispheres
197.4
Principal sensory trigeminal nucleus nTPM: 185.1
2158
Male, age 61, both hemispheres
205.8
2324
Male, age 76, both hemispheres
194.0
2367
Female, age 91, left hemisphere
177.8
2008
Male, age 80, left hemisphere
162.9
Reticular pontine nucleus, caudal nTPM: 215.5
2457
Female, age 91, both hemispheres
241.7
2092
Male, age 76, both hemispheres
232.2
2559
Male, age 74, both hemispheres
223.8
2332
Male, age 80, right hemisphere
164.1
Reticular pontine nucleus, oral nTPM: 192.1
1939
Male, age 80, both hemispheres
211.2
2366
Female, age 91, both hemispheres
207.6
2167
Male, age 76, both hemispheres
207.5
2012
Female, age 85, both hemispheres
173.6
2361
Male, age 74, both hemispheres
160.5
Reticulotegmental nucleus nTPM: 219.3
2452
Male, age 74, both hemispheres
273.7
2322
Female, age 91, both hemispheres
210.6
2333
Male, age 80, both hemispheres
210.6
2325
Male, age 76, both hemispheres
182.2
Spinal trigeminal nucleus, oral nTPM: 204.5
2164
Male, age 80, both hemispheres
228.1
2737
Female, age 85, both hemispheres
193.2
1978
Male, age 76, both hemispheres
192.1
Subcoeruleus area nTPM: 209.1
2451
Male, age 74, both hemispheres
274.7
2323
Female, age 91, left hemisphere
210.3
2369
Female, age 85, left hemisphere
202.2
1958
Male, age 80, both hemispheres
179.9
2089
Male, age 76, left hemisphere
178.4
Superior olive nTPM: 181.3
2020
Male, age 76, both hemispheres
211.0
2364
Male, age 74, right hemisphere
191.0
1875
Female, age 85, both hemispheres
172.9
2329
Male, age 80, right hemisphere
169.3
2561
Female, age 91, both hemispheres
162.4
Ventral periolivary nuclei nTPM: 169.6
2165
Male, age 80, both hemispheres
186.3
2023
Male, age 76, both hemispheres
173.7
2130
Female, age 85, both hemispheres
169.2
2794
Female, age 91, left hemisphere
149.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 190.1
2161
Male, age 80, both hemispheres
210.8
2359
Male, age 61, both hemispheres
205.2
2840
Female, age 85, both hemispheres
182.8
2449
Male, age 74, both hemispheres
182.3
2456
Female, age 91, both hemispheres
179.9
1959
Male, age 76, both hemispheres
179.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.0
Pig sample
Sample description
nTPM
Pons nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
Sample A
Female
0.0
Sample B
Female
0.0
Sample C
Male
0.0
Sample D
Male
0.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
