HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:19.0 nTPM
HPA Brain:23.6 nTPM
GTEx:19.0 nTPM
FANTOM5:31.8 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:21.4 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058265Antibody CAB046486
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 23.4
2529 Female, age 94, left hemisphere 27.5
2148 Female, age 91, left hemisphere 25.0
2621 Female, age 67, right hemisphere 23.5
1898 Male, age 80, left hemisphere 22.8
1911 Female, age 85, right hemisphere 21.4
1855 Male, age 76, left hemisphere 20.4
Dentate gyrus
nTPM: 20.6
2530 Female, age 94, left hemisphere 22.9
2246 Female, age 85, both hemispheres 22.6
2528 Male, age 74, both hemispheres 21.5
2531 Female, age 67, both hemispheres 20.5
2010 Male, age 76, both hemispheres 20.0
1927 Female, age 91, both hemispheres 16.2
Entorhinal gyrus
nTPM: 22.5
2117 Female, age 91, right hemisphere 25.6
1938 Female, age 85, left hemisphere 23.8
2764 Male, age 80, right hemisphere 22.9
2686 Male, age 75, right hemisphere 21.7
1787 Male, age 76, left hemisphere 21.5
2613 Female, age 94, left hemisphere 19.7
Hippocampus, CA1
nTPM: 21.1
2527 Male, age 74, both hemispheres 24.9
1873 Female, age 85, both hemispheres 21.6
2749 Male, age 80, left hemisphere 19.9
2045 Male, age 76, both hemispheres 19.6
2082 Female, age 91, right hemisphere 19.5
Hippocampus, CA2
nTPM: 21.3
1963 Male, age 80, left hemisphere 23.2
1940 Female, age 85, left hemisphere 22.2
2437 Female, age 94, left hemisphere 21.1
2249 Male, age 74, both hemispheres 21.0
1892 Male, age 76, both hemispheres 20.2
2113 Female, age 91, right hemisphere 20.0
Hippocampus, CA3
nTPM: 20.9
2620 Female, age 94, left hemisphere 23.9
1891 Female, age 85, both hemispheres 22.5
2861 Female, age 67, both hemispheres 22.2
2436 Male, age 74, both hemispheres 20.7
2137 Male, age 80, left hemisphere 18.5
1867 Male, age 76, both hemispheres 17.9
Parahippocampal cortex
nTPM: 22.2
2692 Male, age 74, both hemispheres 26.8
2245 Female, age 91, both hemispheres 24.8
2622 Female, age 67, right hemisphere 23.7
2532 Female, age 72, left hemisphere 22.9
1850 Male, age 80, both hemispheres 22.8
1990 Female, age 91, right hemisphere 20.8
2250 Female, age 67, right hemisphere 20.4
2693 Female, age 94, both hemispheres 20.0
2018 Male, age 76, both hemispheres 19.9
1933 Female, age 85, both hemispheres 19.7
Perirhinal gyrus
nTPM: 21.4
1794 Male, age 80, right hemisphere 24.5
1847 Female, age 91, left hemisphere 22.3
1841 Female, age 85, right hemisphere 20.9
2848 Male, age 76, right hemisphere 19.9
2521 Female, age 94, right hemisphere 19.3
Subiculum
nTPM: 23.6
2619 Male, age 74, both hemispheres 26.0
2438 Female, age 94, left hemisphere 24.4
1901 Male, age 80, both hemispheres 23.9
2729 Female, age 91, right hemisphere 23.3
1977 Female, age 85, both hemispheres 22.0
2042 Male, age 76, both hemispheres 21.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.0
Samples: 197

Max nTPM: 32.9
Min nTPM: 12.6
Std nTPM: 3.0
Median nTPM: 18.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 32.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 26.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 26.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 25.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 24.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 24.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 24.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 23.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.8
FF:10153-102I9 76 years, female 42.9
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.1
Pig sample Sample description nTPM
Subiculum
nTPM: 26.1
Samples: 4

Max nTPM: 30.0
Min nTPM: 23.4
Sample A Female 30.0
Sample B Female 24.1
Sample C Male 27.0
Sample D Male 23.4
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 25.7
Min nTPM: 19.9
Sample A Female 24.7
Sample B Female 22.2
Sample C Male 25.7
Sample D Male 19.9
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 26.7
Min nTPM: 20.4
Sample A Female 26.7
Sample B Female 20.4
Sample C Male 25.6
Sample D Male 23.7
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 34.4
Min nTPM: 20.9
Sample A Female 23.4
Sample B Female 20.9
Sample C Male 34.4
Sample D Male 22.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 23.2
Min nTPM: 19.6
Sample A Male 21.0
Sample B Male 21.8
Sample C Female 19.6
Sample D Female 23.2
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.0
Sample A Male 17.0
Sample B Male 20.1
Sample C Female 20.8
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
70724673 Antisense, RP_050705_02_D10, Mouse strain C57BL/6J (56 days, male) 3.1

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