HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:245.6 nTPM
HPA Brain:309.2 nTPM
GTEx:245.6 nTPM
FANTOM5:323.2 Scaled Tags Per Million
Pig:230.3 nTPM
Mouse:798.7 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036849
Glial cells Low
Neuronal cells High

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 309.2
Sample id Sample description nTPM
Hippocampus
nTPM: 213.9
1898 Male, age 80, left hemisphere 312.0
1855 Male, age 76, left hemisphere 241.6
2621 Female, age 67, right hemisphere 218.8
2148 Female, age 91, left hemisphere 186.0
2529 Female, age 94, left hemisphere 174.4
1911 Female, age 85, right hemisphere 150.6
Dentate gyrus
nTPM: 222.3
2010 Male, age 76, both hemispheres 274.3
1927 Female, age 91, both hemispheres 262.4
2530 Female, age 94, left hemisphere 256.4
2246 Female, age 85, both hemispheres 196.7
2528 Male, age 74, both hemispheres 172.8
2531 Female, age 67, both hemispheres 171.2
Entorhinal gyrus
nTPM: 229.4
2764 Male, age 80, right hemisphere 301.3
1938 Female, age 85, left hemisphere 265.3
1787 Male, age 76, left hemisphere 246.4
2613 Female, age 94, left hemisphere 238.9
2117 Female, age 91, right hemisphere 168.5
2686 Male, age 75, right hemisphere 156.2
Hippocampus, CA1
nTPM: 243.5
2749 Male, age 80, left hemisphere 361.2
2045 Male, age 76, both hemispheres 269.7
1873 Female, age 85, both hemispheres 238.9
2527 Male, age 74, both hemispheres 191.3
2082 Female, age 91, right hemisphere 156.1
Hippocampus, CA2
nTPM: 226.7
1892 Male, age 76, both hemispheres 326.2
1963 Male, age 80, left hemisphere 279.3
2437 Female, age 94, left hemisphere 210.6
1940 Female, age 85, left hemisphere 200.6
2249 Male, age 74, both hemispheres 188.8
2113 Female, age 91, right hemisphere 155.0
Hippocampus, CA3
nTPM: 216.6
1867 Male, age 76, both hemispheres 271.0
2137 Male, age 80, left hemisphere 260.8
2620 Female, age 94, left hemisphere 208.4
1891 Female, age 85, both hemispheres 189.7
2436 Male, age 74, both hemispheres 188.5
2861 Female, age 67, both hemispheres 181.0
Parahippocampal cortex
nTPM: 215.0
1850 Male, age 80, both hemispheres 327.7
1990 Female, age 91, right hemisphere 256.6
1933 Female, age 85, both hemispheres 236.5
2245 Female, age 91, both hemispheres 224.8
2532 Female, age 72, left hemisphere 208.3
2018 Male, age 76, both hemispheres 204.2
2250 Female, age 67, right hemisphere 203.7
2693 Female, age 94, both hemispheres 186.1
2692 Male, age 74, both hemispheres 156.1
2622 Female, age 67, right hemisphere 145.7
Perirhinal gyrus
nTPM: 309.2
1847 Female, age 91, left hemisphere 384.8
1794 Male, age 80, right hemisphere 360.7
1841 Female, age 85, right hemisphere 278.9
2521 Female, age 94, right hemisphere 275.2
2848 Male, age 76, right hemisphere 246.6
Subiculum
nTPM: 186.7
1977 Female, age 85, both hemispheres 246.2
1901 Male, age 80, both hemispheres 228.6
2619 Male, age 74, both hemispheres 175.4
2042 Male, age 76, both hemispheres 162.9
2438 Female, age 94, left hemisphere 162.5
2729 Female, age 91, right hemisphere 144.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 245.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 245.6
Samples: 197

Max nTPM: 600.6
Min nTPM: 131.9
Std nTPM: 84.6
Median nTPM: 222.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 600.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 511.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 473.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 468.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 459.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 421.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 410.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 409.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 406.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 406.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 403.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 323.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 323.2
FF:10169-103B7 60 years, female 412.3
FF:10153-102I9 76 years, female 234.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 230.3
Pig sample Sample description nTPM
Subiculum
nTPM: 203.4
Samples: 4

Max nTPM: 266.8
Min nTPM: 175.1
Sample A Female 266.8
Sample B Female 178.7
Sample C Male 192.9
Sample D Male 175.1
Dorsal hippocampus
nTPM: 230.3
Samples: 4

Max nTPM: 289.4
Min nTPM: 170.8
Sample A Female 289.4
Sample B Female 242.2
Sample C Male 218.7
Sample D Male 170.8
Entorhinal cortex
nTPM: 224.7
Samples: 4

Max nTPM: 248.9
Min nTPM: 184.0
Sample A Female 248.9
Sample B Female 242.2
Sample C Male 223.7
Sample D Male 184.0
Ventral hippocampus
nTPM: 224.8
Samples: 4

Max nTPM: 279.4
Min nTPM: 154.3
Sample A Female 257.8
Sample B Female 154.3
Sample C Male 279.4
Sample D Male 207.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 798.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 798.7
Samples: 4

Max nTPM: 886.3
Min nTPM: 721.1
Sample A Male 721.1
Sample B Male 791.7
Sample C Female 795.8
Sample D Female 886.3
Hippocampal formation
nTPM: 748.7
Samples: 4

Max nTPM: 819.7
Min nTPM: 709.0
Sample A Male 819.7
Sample B Male 709.0
Sample C Female 740.8
Sample D Female 725.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
101 Antisense, RP_Baylor_102629, Mouse strain C57BL/6J (56 days, male) 9.5

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