HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.5 nTPM
HPA Brain:39.6 nTPM
GTEx:12.5 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:25.0 nTPM
Mouse:17.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035428
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.6
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
2148 Female, age 91, left hemisphere 43.1
1898 Male, age 80, left hemisphere 40.2
2529 Female, age 94, left hemisphere 40.0
1855 Male, age 76, left hemisphere 38.1
2621 Female, age 67, right hemisphere 38.1
1911 Female, age 85, right hemisphere 34.9
Dentate gyrus
nTPM: 39.6
2010 Male, age 76, both hemispheres 45.4
2528 Male, age 74, both hemispheres 42.0
2246 Female, age 85, both hemispheres 39.9
2530 Female, age 94, left hemisphere 37.8
2531 Female, age 67, both hemispheres 37.3
1927 Female, age 91, both hemispheres 35.4
Entorhinal gyrus
nTPM: 35.9
2117 Female, age 91, right hemisphere 38.6
2613 Female, age 94, left hemisphere 37.1
2686 Male, age 75, right hemisphere 36.1
1787 Male, age 76, left hemisphere 35.6
1938 Female, age 85, left hemisphere 34.2
2764 Male, age 80, right hemisphere 33.8
Hippocampus, CA1
nTPM: 39.3
2527 Male, age 74, both hemispheres 43.8
2749 Male, age 80, left hemisphere 40.1
1873 Female, age 85, both hemispheres 38.9
2082 Female, age 91, right hemisphere 37.5
2045 Male, age 76, both hemispheres 36.1
Hippocampus, CA2
nTPM: 38.6
2437 Female, age 94, left hemisphere 40.3
2249 Male, age 74, both hemispheres 40.1
1963 Male, age 80, left hemisphere 39.9
2113 Female, age 91, right hemisphere 38.3
1892 Male, age 76, both hemispheres 38.2
1940 Female, age 85, left hemisphere 34.5
Hippocampus, CA3
nTPM: 38.3
1867 Male, age 76, both hemispheres 42.0
2620 Female, age 94, left hemisphere 41.6
2137 Male, age 80, left hemisphere 38.6
2436 Male, age 74, both hemispheres 37.6
2861 Female, age 67, both hemispheres 35.7
1891 Female, age 85, both hemispheres 34.5
Parahippocampal cortex
nTPM: 34.1
2245 Female, age 91, both hemispheres 36.8
2622 Female, age 67, right hemisphere 36.6
2692 Male, age 74, both hemispheres 36.5
2250 Female, age 67, right hemisphere 35.8
2532 Female, age 72, left hemisphere 34.8
1990 Female, age 91, right hemisphere 34.7
1933 Female, age 85, both hemispheres 33.4
2693 Female, age 94, both hemispheres 32.1
1850 Male, age 80, both hemispheres 30.8
2018 Male, age 76, both hemispheres 29.7
Perirhinal gyrus
nTPM: 33.0
1794 Male, age 80, right hemisphere 36.4
1841 Female, age 85, right hemisphere 33.7
2521 Female, age 94, right hemisphere 31.8
1847 Female, age 91, left hemisphere 31.5
2848 Male, age 76, right hemisphere 31.4
Subiculum
nTPM: 37.1
2729 Female, age 91, right hemisphere 41.1
2438 Female, age 94, left hemisphere 40.9
2042 Male, age 76, both hemispheres 37.5
2619 Male, age 74, both hemispheres 36.8
1901 Male, age 80, both hemispheres 34.0
1977 Female, age 85, both hemispheres 32.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 27.0
Min nTPM: 7.1
Std nTPM: 2.5
Median nTPM: 12.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 22.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 20.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 18.5
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 18.0
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 17.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 17.3
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 16.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 16.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 16.4
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 16.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 42.9
FF:10169-103B7 60 years, female 39.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.0
Pig sample Sample description nTPM
Subiculum
nTPM: 22.5
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.6
Sample A Female 26.6
Sample B Female 20.6
Sample C Male 21.7
Sample D Male 21.1
Dorsal hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 29.3
Min nTPM: 18.6
Sample A Female 29.3
Sample B Female 24.9
Sample C Male 27.0
Sample D Male 18.6
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 25.2
Min nTPM: 20.8
Sample A Female 23.2
Sample B Female 25.2
Sample C Male 23.9
Sample D Male 20.8
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 27.7
Min nTPM: 18.9
Sample A Female 24.6
Sample B Female 18.9
Sample C Male 27.7
Sample D Male 24.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 17.6
Min nTPM: 16.4
Sample A Male 17.6
Sample B Male 16.4
Sample C Female 17.5
Sample D Female 16.4
Hippocampal formation
nTPM: 17.0
Samples: 4

Max nTPM: 17.3
Min nTPM: 16.7
Sample A Male 17.2
Sample B Male 16.7
Sample C Female 17.3
Sample D Female 16.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73731331 Antisense, RP_051212_01_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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