HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:18.3 nTPM
HPA Brain:37.3 nTPM
GTEx:18.3 nTPM
FANTOM5:46.9 Scaled Tags Per Million
Pig:56.4 nTPM
Mouse:22.1 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005480Antibody HPA024300Antibody CAB037030
Glial cells MediumLowNot detected
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.3
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
1855 Male, age 76, left hemisphere 41.4
2621 Female, age 67, right hemisphere 40.7
2529 Female, age 94, left hemisphere 35.6
1911 Female, age 85, right hemisphere 35.3
1898 Male, age 80, left hemisphere 34.5
2148 Female, age 91, left hemisphere 33.9
Dentate gyrus
nTPM: 36.3
2530 Female, age 94, left hemisphere 47.4
2010 Male, age 76, both hemispheres 36.7
2531 Female, age 67, both hemispheres 35.0
2246 Female, age 85, both hemispheres 34.7
2528 Male, age 74, both hemispheres 34.5
1927 Female, age 91, both hemispheres 29.1
Entorhinal gyrus
nTPM: 36.4
2613 Female, age 94, left hemisphere 42.3
2117 Female, age 91, right hemisphere 38.3
2764 Male, age 80, right hemisphere 37.8
1787 Male, age 76, left hemisphere 37.3
1938 Female, age 85, left hemisphere 32.7
2686 Male, age 75, right hemisphere 30.1
Hippocampus, CA1
nTPM: 33.4
2045 Male, age 76, both hemispheres 35.7
1873 Female, age 85, both hemispheres 34.6
2527 Male, age 74, both hemispheres 33.0
2082 Female, age 91, right hemisphere 32.2
2749 Male, age 80, left hemisphere 31.6
Hippocampus, CA2
nTPM: 34.6
2437 Female, age 94, left hemisphere 38.4
2249 Male, age 74, both hemispheres 36.7
1963 Male, age 80, left hemisphere 34.6
1892 Male, age 76, both hemispheres 32.9
1940 Female, age 85, left hemisphere 32.9
2113 Female, age 91, right hemisphere 31.8
Hippocampus, CA3
nTPM: 36.8
2620 Female, age 94, left hemisphere 46.0
2861 Female, age 67, both hemispheres 38.6
2436 Male, age 74, both hemispheres 38.2
1891 Female, age 85, both hemispheres 36.6
1867 Male, age 76, both hemispheres 32.6
2137 Male, age 80, left hemisphere 29.2
Parahippocampal cortex
nTPM: 33.1
2532 Female, age 72, left hemisphere 36.4
2692 Male, age 74, both hemispheres 36.2
2245 Female, age 91, both hemispheres 34.6
2622 Female, age 67, right hemisphere 34.4
2250 Female, age 67, right hemisphere 33.5
2018 Male, age 76, both hemispheres 32.9
1990 Female, age 91, right hemisphere 32.8
1933 Female, age 85, both hemispheres 32.0
2693 Female, age 94, both hemispheres 29.4
1850 Male, age 80, both hemispheres 28.3
Perirhinal gyrus
nTPM: 29.6
2848 Male, age 76, right hemisphere 30.4
1841 Female, age 85, right hemisphere 30.1
2521 Female, age 94, right hemisphere 29.9
1794 Male, age 80, right hemisphere 29.2
1847 Female, age 91, left hemisphere 28.4
Subiculum
nTPM: 37.3
2042 Male, age 76, both hemispheres 43.0
2619 Male, age 74, both hemispheres 38.9
2438 Female, age 94, left hemisphere 37.7
1901 Male, age 80, both hemispheres 37.4
1977 Female, age 85, both hemispheres 35.1
2729 Female, age 91, right hemisphere 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.3
Samples: 197

Max nTPM: 38.6
Min nTPM: 7.9
Std nTPM: 4.4
Median nTPM: 17.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 33.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 32.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 31.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 29.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 28.8
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 28.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 27.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 27.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 27.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.9
FF:10153-102I9 76 years, female 50.2
FF:10169-103B7 60 years, female 43.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.4
Pig sample Sample description nTPM
Subiculum
nTPM: 56.4
Samples: 4

Max nTPM: 71.3
Min nTPM: 46.0
Sample A Female 71.3
Sample B Female 47.3
Sample C Male 60.9
Sample D Male 46.0
Dorsal hippocampus
nTPM: 48.7
Samples: 4

Max nTPM: 59.1
Min nTPM: 36.2
Sample A Female 59.1
Sample B Female 52.1
Sample C Male 47.4
Sample D Male 36.2
Entorhinal cortex
nTPM: 51.0
Samples: 4

Max nTPM: 59.4
Min nTPM: 39.7
Sample A Female 59.4
Sample B Female 39.7
Sample C Male 56.3
Sample D Male 48.7
Ventral hippocampus
nTPM: 55.6
Samples: 4

Max nTPM: 75.5
Min nTPM: 35.8
Sample A Female 53.6
Sample B Female 35.8
Sample C Male 75.5
Sample D Male 57.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 24.3
Min nTPM: 19.9
Sample A Male 21.0
Sample B Male 21.0
Sample C Female 19.9
Sample D Female 24.3
Hippocampal formation
nTPM: 22.1
Samples: 4

Max nTPM: 24.6
Min nTPM: 17.8
Sample A Male 17.8
Sample B Male 21.7
Sample C Female 24.6
Sample D Female 24.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
68845771 Antisense, RP_050224_02_E03, Mouse strain C57BL/6J (56 days, male) 9.2

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