HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.8 nTPM
HPA Brain:43.8 nTPM
GTEx:25.8 nTPM
FANTOM5:107.1 Scaled Tags Per Million
Pig:60.4 nTPM
Mouse:212.9 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022013
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 39.8
1898 Male, age 80, left hemisphere 48.5
1911 Female, age 85, right hemisphere 42.4
2529 Female, age 94, left hemisphere 41.6
2621 Female, age 67, right hemisphere 37.4
1855 Male, age 76, left hemisphere 36.1
2148 Female, age 91, left hemisphere 32.6
Dentate gyrus
nTPM: 38.2
2530 Female, age 94, left hemisphere 54.5
2010 Male, age 76, both hemispheres 50.9
2246 Female, age 85, both hemispheres 34.5
1927 Female, age 91, both hemispheres 33.8
2531 Female, age 67, both hemispheres 30.9
2528 Male, age 74, both hemispheres 24.9
Entorhinal gyrus
nTPM: 34.8
2117 Female, age 91, right hemisphere 45.4
1938 Female, age 85, left hemisphere 39.0
2764 Male, age 80, right hemisphere 37.3
1787 Male, age 76, left hemisphere 31.1
2613 Female, age 94, left hemisphere 29.6
2686 Male, age 75, right hemisphere 26.1
Hippocampus, CA1
nTPM: 43.8
2749 Male, age 80, left hemisphere 71.3
1873 Female, age 85, both hemispheres 44.7
2045 Male, age 76, both hemispheres 36.5
2527 Male, age 74, both hemispheres 35.9
2082 Female, age 91, right hemisphere 30.6
Hippocampus, CA2
nTPM: 39.0
1963 Male, age 80, left hemisphere 46.7
1892 Male, age 76, both hemispheres 43.9
1940 Female, age 85, left hemisphere 42.9
2437 Female, age 94, left hemisphere 37.5
2113 Female, age 91, right hemisphere 31.6
2249 Male, age 74, both hemispheres 31.5
Hippocampus, CA3
nTPM: 38.7
2137 Male, age 80, left hemisphere 62.5
1867 Male, age 76, both hemispheres 51.8
1891 Female, age 85, both hemispheres 41.9
2436 Male, age 74, both hemispheres 26.9
2861 Female, age 67, both hemispheres 26.3
2620 Female, age 94, left hemisphere 22.7
Parahippocampal cortex
nTPM: 32.9
2245 Female, age 91, both hemispheres 48.9
2018 Male, age 76, both hemispheres 46.5
1933 Female, age 85, both hemispheres 35.7
1990 Female, age 91, right hemisphere 34.9
2532 Female, age 72, left hemisphere 34.3
1850 Male, age 80, both hemispheres 34.0
2250 Female, age 67, right hemisphere 33.3
2692 Male, age 74, both hemispheres 21.4
2693 Female, age 94, both hemispheres 20.2
2622 Female, age 67, right hemisphere 19.8
Perirhinal gyrus
nTPM: 32.8
1847 Female, age 91, left hemisphere 35.6
1841 Female, age 85, right hemisphere 35.2
2521 Female, age 94, right hemisphere 34.4
1794 Male, age 80, right hemisphere 32.9
2848 Male, age 76, right hemisphere 26.0
Subiculum
nTPM: 40.4
1901 Male, age 80, both hemispheres 58.6
2042 Male, age 76, both hemispheres 52.0
1977 Female, age 85, both hemispheres 43.7
2438 Female, age 94, left hemisphere 34.4
2619 Male, age 74, both hemispheres 27.4
2729 Female, age 91, right hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.8
Samples: 197

Max nTPM: 60.8
Min nTPM: 5.7
Std nTPM: 9.8
Median nTPM: 25.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 60.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 55.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 50.4
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 50.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 49.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 47.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 46.7
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 45.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 45.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 45.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.1
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 93.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.4
Pig sample Sample description nTPM
Subiculum
nTPM: 39.2
Samples: 4

Max nTPM: 49.8
Min nTPM: 32.3
Sample A Female 49.8
Sample B Female 39.5
Sample C Male 32.3
Sample D Male 35.2
Dorsal hippocampus
nTPM: 60.4
Samples: 4

Max nTPM: 78.5
Min nTPM: 45.7
Sample A Female 78.5
Sample B Female 64.2
Sample C Male 45.7
Sample D Male 53.3
Entorhinal cortex
nTPM: 34.9
Samples: 4

Max nTPM: 41.0
Min nTPM: 28.4
Sample A Female 32.7
Sample B Female 41.0
Sample C Male 37.3
Sample D Male 28.4
Ventral hippocampus
nTPM: 42.4
Samples: 4

Max nTPM: 68.8
Min nTPM: 31.9
Sample A Female 31.9
Sample B Female 35.1
Sample C Male 33.7
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 212.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.4
Samples: 4

Max nTPM: 124.5
Min nTPM: 95.4
Sample A Male 95.4
Sample B Male 97.5
Sample C Female 124.5
Sample D Female 104.0
Hippocampal formation
nTPM: 212.9
Samples: 4

Max nTPM: 246.9
Min nTPM: 186.8
Sample A Male 210.9
Sample B Male 206.8
Sample C Female 246.9
Sample D Female 186.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
69526898 Antisense, RP_050421_01_H02, Mouse strain C57BL/6J (56 days, male) 6.3

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