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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
87.2
nTPM
HPA Brain:
328.5
nTPM
GTEx:
87.2
nTPM
FANTOM5:
207.1
Scaled Tags Per Million
Pig:
284.3
nTPM
Mouse:
193.7
nTPM
Allen mouse:
14.7
Expression energy
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
87.2
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 87.2
Samples: 197
Max nTPM: 266.1
Min nTPM: 11.6
Std nTPM: 46.9
Median nTPM: 76.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
266.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
230.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
210.7
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
210.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
196.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
195.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
194.4
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
190.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
186.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
183.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
172.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
168.2
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
167.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
166.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
165.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
164.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
163.1
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
157.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
155.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
154.0
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
146.7
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
146.3
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
142.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
140.6
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
139.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
139.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
137.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
136.9
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
135.8
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
135.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
134.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
133.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
132.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
131.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
129.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
128.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
127.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
127.5
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
126.2
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
124.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
124.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
123.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
123.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
123.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
122.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
120.0
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
119.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
118.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
117.5
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
116.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
113.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
110.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
110.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
108.8
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
108.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
108.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
107.9
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
107.8
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
106.9
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
103.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
103.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
102.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
102.7
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
102.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
102.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
101.7
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
100.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
99.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
99.8
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
98.4
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
98.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
98.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
97.6
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
96.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
96.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
96.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
96.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
95.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
95.1
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
93.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
88.6
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
87.2
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
87.1
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
86.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
86.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
86.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
85.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
84.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
84.4
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
84.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
83.2
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
81.9
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
80.7
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
80.5
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
80.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
79.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
79.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
78.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
76.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
76.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
75.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
74.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
74.8
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
74.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
74.4
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
74.3
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
73.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
72.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
71.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
71.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
71.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
71.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
71.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
70.5
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
70.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
70.1
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
67.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
67.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
67.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
66.5
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
66.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
66.1
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
65.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
65.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
64.8
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
64.2
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
64.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
63.5
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
63.0
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
62.5
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
61.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
61.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
60.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
60.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
60.4
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
59.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
59.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
59.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
58.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
58.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
57.7
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
57.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
56.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
55.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
54.6
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
54.2
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
54.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
53.6
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
52.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
52.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
51.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
50.9
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
49.8
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
47.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
47.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
46.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
46.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
45.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
43.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
42.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
42.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
41.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
41.6
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
41.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
40.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
40.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
40.2
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
38.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
37.5
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
37.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
36.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
36.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
35.9
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
34.6
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
34.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
34.2
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
33.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
33.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
32.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
32.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
31.8
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
31.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
30.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
28.8
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
28.7
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
28.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
27.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
26.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
26.3
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
24.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
23.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
21.7
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
20.2
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
19.8
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
19.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
17.3
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
11.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
193.7
Mouse sample
Sample description
nTPM
Entorhinal cortex nTPM: 193.7
Samples: 4
Max nTPM: 246.2
Min nTPM: 169.0
Sample A
Male
173.7
Sample B
Male
185.9
Sample C
Female
169.0
Sample D
Female
246.2
Hippocampal formation nTPM: 174.3
Samples: 4
Max nTPM: 203.7
Min nTPM: 153.0
Sample A
Male
159.6
Sample B
Male
180.8
Sample C
Female
203.7
Sample D
Female
153.0
HIPPOCAMPAL FORMATION - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.