HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:118.8 nTPM
HPA Brain:64.9 nTPM
GTEx:118.8 nTPM
FANTOM5:105.5 Scaled Tags Per Million
Pig:66.0 nTPM
Mouse:59.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 64.9
Sample id Sample description nTPM
Hippocampus
nTPM: 64.9
2621 Female, age 67, right hemisphere 73.5
1898 Male, age 80, left hemisphere 71.3
1855 Male, age 76, left hemisphere 68.3
1911 Female, age 85, right hemisphere 60.9
2529 Female, age 94, left hemisphere 59.6
2148 Female, age 91, left hemisphere 56.0
Dentate gyrus
nTPM: 61.2
2530 Female, age 94, left hemisphere 67.3
2246 Female, age 85, both hemispheres 64.7
2528 Male, age 74, both hemispheres 62.3
1927 Female, age 91, both hemispheres 60.9
2010 Male, age 76, both hemispheres 60.0
2531 Female, age 67, both hemispheres 52.2
Entorhinal gyrus
nTPM: 52.6
2117 Female, age 91, right hemisphere 61.5
1938 Female, age 85, left hemisphere 57.5
1787 Male, age 76, left hemisphere 53.5
2764 Male, age 80, right hemisphere 52.1
2686 Male, age 75, right hemisphere 49.6
2613 Female, age 94, left hemisphere 41.5
Hippocampus, CA1
nTPM: 61.0
2527 Male, age 74, both hemispheres 70.9
2749 Male, age 80, left hemisphere 63.1
2045 Male, age 76, both hemispheres 60.9
2082 Female, age 91, right hemisphere 58.3
1873 Female, age 85, both hemispheres 52.0
Hippocampus, CA2
nTPM: 59.5
2249 Male, age 74, both hemispheres 74.1
1963 Male, age 80, left hemisphere 62.4
1892 Male, age 76, both hemispheres 56.8
1940 Female, age 85, left hemisphere 55.7
2437 Female, age 94, left hemisphere 55.2
2113 Female, age 91, right hemisphere 52.6
Hippocampus, CA3
nTPM: 58.8
2436 Male, age 74, both hemispheres 75.0
1867 Male, age 76, both hemispheres 58.3
1891 Female, age 85, both hemispheres 57.0
2137 Male, age 80, left hemisphere 56.6
2861 Female, age 67, both hemispheres 54.8
2620 Female, age 94, left hemisphere 50.7
Parahippocampal cortex
nTPM: 57.7
2018 Male, age 76, both hemispheres 63.4
1933 Female, age 85, both hemispheres 61.8
2245 Female, age 91, both hemispheres 61.0
2250 Female, age 67, right hemisphere 60.3
2692 Male, age 74, both hemispheres 60.1
2532 Female, age 72, left hemisphere 57.7
1990 Female, age 91, right hemisphere 57.6
2693 Female, age 94, both hemispheres 53.7
1850 Male, age 80, both hemispheres 51.7
2622 Female, age 67, right hemisphere 49.8
Perirhinal gyrus
nTPM: 53.7
1841 Female, age 85, right hemisphere 57.2
1847 Female, age 91, left hemisphere 54.7
1794 Male, age 80, right hemisphere 53.6
2521 Female, age 94, right hemisphere 52.8
2848 Male, age 76, right hemisphere 50.1
Subiculum
nTPM: 62.2
2042 Male, age 76, both hemispheres 71.5
2619 Male, age 74, both hemispheres 68.7
1901 Male, age 80, both hemispheres 68.6
1977 Female, age 85, both hemispheres 55.5
2438 Female, age 94, left hemisphere 54.5
2729 Female, age 91, right hemisphere 54.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 118.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 118.8
Samples: 197

Max nTPM: 246.5
Min nTPM: 54.2
Std nTPM: 28.1
Median nTPM: 119.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 246.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 219.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 187.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 182.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 178.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 178.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 169.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 164.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 161.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 158.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 157.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 105.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.5
FF:10169-103B7 60 years, female 122.5
FF:10153-102I9 76 years, female 88.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.0
Pig sample Sample description nTPM
Subiculum
nTPM: 55.4
Samples: 4

Max nTPM: 62.5
Min nTPM: 48.9
Sample A Female 62.5
Sample B Female 54.0
Sample C Male 48.9
Sample D Male 56.2
Dorsal hippocampus
nTPM: 66.1
Samples: 4

Max nTPM: 78.3
Min nTPM: 57.1
Sample A Female 78.3
Sample B Female 59.8
Sample C Male 69.0
Sample D Male 57.1
Entorhinal cortex
nTPM: 52.4
Samples: 4

Max nTPM: 56.4
Min nTPM: 48.7
Sample A Female 51.8
Sample B Female 52.6
Sample C Male 56.4
Sample D Male 48.7
Ventral hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 75.8
Min nTPM: 46.4
Sample A Female 57.4
Sample B Female 46.4
Sample C Male 75.8
Sample D Male 65.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.5
Samples: 4

Max nTPM: 59.8
Min nTPM: 52.7
Sample A Male 52.7
Sample B Male 59.8
Sample C Female 56.5
Sample D Female 53.1
Hippocampal formation
nTPM: 59.8
Samples: 4

Max nTPM: 64.2
Min nTPM: 54.3
Sample A Male 59.5
Sample B Male 54.3
Sample C Female 61.2
Sample D Female 64.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
67767459 Antisense, RP_040916_02_A09, Mouse strain C57BL/6J (56 days, male) 0.5

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