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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
48.9
nTPM
GTEx:
48.9
nTPM
FANTOM5:
172.1
Scaled Tags Per Million
Pig:
45.0
nTPM
Mouse:
59.0
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
48.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 48.9
Samples: 105
Max nTPM: 74.5
Min nTPM: 15.2
Std nTPM: 12.1
Median nTPM: 0.0
319_1
81 years, male
74.5
218_1
71 years, female
73.2
243_1
75 years, male
72.4
452_1
88 years, female
68.9
99_1
64 years, male
67.8
379_1
60 years, male
66.2
394_1
75 years, female
65.4
177_1
74 years, male
64.2
406_1
79 years, male
63.7
320_1
89 years, female
63.5
356_1
87 years, female
63.3
506_1
65 years, male
61.7
172_1
72 years, female
61.2
173_1
67 years, male
60.8
42_1
85 years, male
60.4
317_1
60 years, male
60.4
354_1
81 years, female
60.2
153_1
70 years, female
59.6
189_1
76 years, male
59.3
286_1
68 years, female
57.9
4_1
88 years, female
57.8
322_1
76 years, male
57.8
384_1
83 years, male
57.8
389_1
86 years, female
57.7
352_1
62 years, male
57.2
41_1
94 years, female
56.7
425_1
59 years, female
56.5
2_1
77 years, female
56.4
163_1
78 years, male
56.4
404_1
82 years, female
56.4
35_1
74 years, female
56.1
377_1
82 years, female
55.9
447_1
81 years, male
55.7
321_1
62 years, female
55.6
355_1
70 years, female
55.6
308_1
70 years, female
55.4
405_1
91 years, male
55.4
318_1
68 years, male
54.9
375_1
74 years, female
54.6
6_1
73 years, female
54.4
120_1
70 years, female
54.3
376_1
75 years, female
54.3
349_1
83 years, male
54.2
386_1
76 years, male
54.2
115_1
83 years, male
53.9
293_1
68 years, female
52.8
350_1
84 years, female
52.7
353_1
82 years, female
52.3
137_1
83 years, male
52.1
351_1
91 years, male
52.1
517_1
88 years, male
52.1
335_1
73 years, female
51.7
347_1
72 years, male
51.6
295_1
61 years, female
50.9
292_1
71 years, male
50.8
145_1
84 years, male
50.7
503_1
68 years, male
49.8
251_1
78 years, male
49.7
526_1
61 years, male
48.2
17_1
71 years, male
48.0
237_1
82 years, male
48.0
291_1
76 years, male
48.0
126_1
63 years, male
47.9
396_1
62 years, male
47.7
264_1
73 years, female
46.9
246_1
77 years, male
46.4
162_1
79 years, female
46.3
468_1
89 years, male
44.7
480_1
63 years, male
44.0
9_1
66 years, female
43.9
265_1
87 years, male
43.5
139_1
64 years, female
43.1
142_1
61 years, female
43.0
518_1
75 years, female
42.0
109_1
81 years, female
41.8
307_1
66 years, female
41.2
313_1
79 years, female
41.0
266_1
85 years, male
40.6
316_1
62 years, male
40.6
18_1
88 years, male
40.3
119_1
70 years, female
39.8
499_1
55 years, female
39.7
311_1
78 years, male
39.5
229_1
69 years, female
39.4
288_1
66 years, female
39.4
117_1
61 years, male
38.8
324_1
76 years, male
38.4
495_1
57 years, female
37.8
254_1
77 years, female
37.7
89_1
63 years, male
36.0
217_1
76 years, male
36.0
348_1
84 years, male
35.5
32_1
67 years, male
34.7
315_1
62 years, female
34.7
314_1
67 years, male
33.7
81_1
67 years, male
31.2
414_1
84 years, female
30.4
466_1
57 years, female
28.4
415_1
77 years, female
27.5
43_1
64 years, female
26.6
149_1
88 years, male
26.2
501_1
88 years, male
21.3
413_1
59 years, female
20.3
490_1
67 years, female
15.7
491_1
89 years, female
15.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
