HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:49.3 nTPM
HPA Brain:24.4 nTPM
GTEx:49.3 nTPM
FANTOM5:32.5 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:4.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034794Antibody CAB002582
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.4
1898 Male, age 80, left hemisphere 31.1
2529 Female, age 94, left hemisphere 28.0
2621 Female, age 67, right hemisphere 27.0
1855 Male, age 76, left hemisphere 26.1
1911 Female, age 85, right hemisphere 18.2
2148 Female, age 91, left hemisphere 16.0
Dentate gyrus
nTPM: 22.3
2530 Female, age 94, left hemisphere 33.7
2531 Female, age 67, both hemispheres 27.1
2010 Male, age 76, both hemispheres 24.2
2528 Male, age 74, both hemispheres 19.3
2246 Female, age 85, both hemispheres 16.5
1927 Female, age 91, both hemispheres 12.9
Entorhinal gyrus
nTPM: 15.4
1787 Male, age 76, left hemisphere 24.5
2686 Male, age 75, right hemisphere 18.8
2117 Female, age 91, right hemisphere 14.2
2764 Male, age 80, right hemisphere 12.8
2613 Female, age 94, left hemisphere 12.5
1938 Female, age 85, left hemisphere 9.8
Hippocampus, CA1
nTPM: 16.4
2082 Female, age 91, right hemisphere 23.4
1873 Female, age 85, both hemispheres 18.9
2527 Male, age 74, both hemispheres 16.9
2749 Male, age 80, left hemisphere 11.6
2045 Male, age 76, both hemispheres 11.5
Hippocampus, CA2
nTPM: 21.4
2249 Male, age 74, both hemispheres 27.4
1963 Male, age 80, left hemisphere 25.5
2437 Female, age 94, left hemisphere 25.4
2113 Female, age 91, right hemisphere 19.4
1940 Female, age 85, left hemisphere 16.3
1892 Male, age 76, both hemispheres 14.6
Hippocampus, CA3
nTPM: 20.8
2861 Female, age 67, both hemispheres 43.0
2620 Female, age 94, left hemisphere 19.3
2137 Male, age 80, left hemisphere 15.9
1867 Male, age 76, both hemispheres 15.8
1891 Female, age 85, both hemispheres 15.8
2436 Male, age 74, both hemispheres 15.2
Parahippocampal cortex
nTPM: 15.1
2018 Male, age 76, both hemispheres 20.5
2245 Female, age 91, both hemispheres 18.5
2622 Female, age 67, right hemisphere 17.9
2532 Female, age 72, left hemisphere 17.2
2250 Female, age 67, right hemisphere 14.4
1990 Female, age 91, right hemisphere 14.2
1850 Male, age 80, both hemispheres 12.9
1933 Female, age 85, both hemispheres 12.2
2693 Female, age 94, both hemispheres 12.1
2692 Male, age 74, both hemispheres 10.6
Perirhinal gyrus
nTPM: 15.2
1794 Male, age 80, right hemisphere 18.3
2848 Male, age 76, right hemisphere 17.9
2521 Female, age 94, right hemisphere 14.6
1841 Female, age 85, right hemisphere 13.5
1847 Female, age 91, left hemisphere 11.6
Subiculum
nTPM: 15.6
2042 Male, age 76, both hemispheres 19.6
2438 Female, age 94, left hemisphere 19.0
2619 Male, age 74, both hemispheres 15.1
2729 Female, age 91, right hemisphere 14.3
1977 Female, age 85, both hemispheres 13.8
1901 Male, age 80, both hemispheres 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.3
Samples: 197

Max nTPM: 164.3
Min nTPM: 6.7
Std nTPM: 30.2
Median nTPM: 40.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 164.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 155.8
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 143.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 141.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 141.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 124.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 119.9
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 112.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 106.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 105.1
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 104.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.5
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 15.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Subiculum
nTPM: 15.1
Samples: 4

Max nTPM: 21.5
Min nTPM: 7.7
Sample A Female 16.5
Sample B Female 7.7
Sample C Male 14.5
Sample D Male 21.5
Dorsal hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 23.4
Min nTPM: 7.8
Sample A Female 23.4
Sample B Female 14.7
Sample C Male 22.5
Sample D Male 7.8
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 20.1
Min nTPM: 8.0
Sample A Female 20.1
Sample B Female 15.9
Sample C Male 17.0
Sample D Male 8.0
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 22.2
Min nTPM: 10.0
Sample A Female 21.5
Sample B Female 10.0
Sample C Male 22.2
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 5.5
Min nTPM: 3.4
Sample A Male 5.5
Sample B Male 3.4
Sample C Female 4.6
Sample D Female 4.5
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.0
Sample A Male 2.4
Sample B Male 4.1
Sample C Female 2.0
Sample D Female 4.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68545039 Antisense, RP_050118_02_G10, Mouse strain C57BL/6J (56 days, male) 0.5

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