HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:33.6 nTPM
HPA Brain:66.2 nTPM
GTEx:33.6 nTPM
FANTOM5:107.9 Scaled Tags Per Million
Pig:47.8 nTPM
Mouse:79.7 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.2
Sample id Sample description nTPM
Hippocampus
nTPM: 51.7
1898 Male, age 80, left hemisphere 61.3
2529 Female, age 94, left hemisphere 56.3
2148 Female, age 91, left hemisphere 51.3
2621 Female, age 67, right hemisphere 48.9
1855 Male, age 76, left hemisphere 47.8
1911 Female, age 85, right hemisphere 44.9
Dentate gyrus
nTPM: 52.5
1927 Female, age 91, both hemispheres 60.3
2010 Male, age 76, both hemispheres 53.4
2528 Male, age 74, both hemispheres 51.4
2531 Female, age 67, both hemispheres 51.4
2246 Female, age 85, both hemispheres 50.6
2530 Female, age 94, left hemisphere 47.6
Entorhinal gyrus
nTPM: 57.6
2764 Male, age 80, right hemisphere 67.3
1938 Female, age 85, left hemisphere 63.2
1787 Male, age 76, left hemisphere 60.4
2613 Female, age 94, left hemisphere 54.3
2117 Female, age 91, right hemisphere 50.7
2686 Male, age 75, right hemisphere 49.9
Hippocampus, CA1
nTPM: 56.2
2749 Male, age 80, left hemisphere 79.3
1873 Female, age 85, both hemispheres 54.5
2527 Male, age 74, both hemispheres 49.7
2045 Male, age 76, both hemispheres 49.1
2082 Female, age 91, right hemisphere 48.2
Hippocampus, CA2
nTPM: 53.5
1892 Male, age 76, both hemispheres 66.2
1963 Male, age 80, left hemisphere 60.9
2249 Male, age 74, both hemispheres 50.5
1940 Female, age 85, left hemisphere 49.8
2437 Female, age 94, left hemisphere 47.1
2113 Female, age 91, right hemisphere 46.8
Hippocampus, CA3
nTPM: 57.9
2137 Male, age 80, left hemisphere 71.3
2620 Female, age 94, left hemisphere 61.7
1867 Male, age 76, both hemispheres 58.4
2436 Male, age 74, both hemispheres 54.3
1891 Female, age 85, both hemispheres 53.0
2861 Female, age 67, both hemispheres 48.7
Parahippocampal cortex
nTPM: 55.0
1850 Male, age 80, both hemispheres 70.5
1990 Female, age 91, right hemisphere 63.7
1933 Female, age 85, both hemispheres 58.3
2532 Female, age 72, left hemisphere 54.0
2250 Female, age 67, right hemisphere 53.6
2245 Female, age 91, both hemispheres 51.9
2693 Female, age 94, both hemispheres 51.2
2018 Male, age 76, both hemispheres 50.8
2692 Male, age 74, both hemispheres 49.3
2622 Female, age 67, right hemisphere 47.0
Perirhinal gyrus
nTPM: 66.2
1847 Female, age 91, left hemisphere 73.1
1794 Male, age 80, right hemisphere 71.4
1841 Female, age 85, right hemisphere 66.9
2848 Male, age 76, right hemisphere 63.3
2521 Female, age 94, right hemisphere 56.4
Subiculum
nTPM: 53.6
1977 Female, age 85, both hemispheres 59.5
1901 Male, age 80, both hemispheres 58.2
2438 Female, age 94, left hemisphere 54.3
2619 Male, age 74, both hemispheres 51.5
2729 Female, age 91, right hemisphere 49.2
2042 Male, age 76, both hemispheres 49.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.6
Samples: 197

Max nTPM: 55.7
Min nTPM: 15.9
Std nTPM: 7.0
Median nTPM: 32.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 54.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 52.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 51.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 51.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 50.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 50.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 48.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 45.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 45.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.9
FF:10169-103B7 60 years, female 108.0
FF:10153-102I9 76 years, female 107.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.8
Pig sample Sample description nTPM
Subiculum
nTPM: 43.4
Samples: 4

Max nTPM: 51.0
Min nTPM: 40.3
Sample A Female 51.0
Sample B Female 41.5
Sample C Male 40.6
Sample D Male 40.3
Dorsal hippocampus
nTPM: 47.8
Samples: 4

Max nTPM: 53.5
Min nTPM: 40.4
Sample A Female 53.5
Sample B Female 50.4
Sample C Male 47.0
Sample D Male 40.4
Entorhinal cortex
nTPM: 44.0
Samples: 4

Max nTPM: 49.2
Min nTPM: 37.8
Sample A Female 44.5
Sample B Female 49.2
Sample C Male 44.4
Sample D Male 37.8
Ventral hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 51.7
Min nTPM: 37.8
Sample A Female 44.7
Sample B Female 37.8
Sample C Male 51.7
Sample D Male 45.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 79.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 79.7
Samples: 4

Max nTPM: 84.3
Min nTPM: 76.4
Sample A Male 76.5
Sample B Male 81.4
Sample C Female 76.4
Sample D Female 84.3
Hippocampal formation
nTPM: 74.0
Samples: 4

Max nTPM: 79.7
Min nTPM: 67.8
Sample A Male 74.3
Sample B Male 74.0
Sample C Female 79.7
Sample D Female 67.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
71494623 Antisense, RP_050913_03_A01, Mouse strain C57BL/6J (56 days, male) 2.9

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