HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:259.9 nTPM
HPA Brain:221.5 nTPM
GTEx:259.9 nTPM
FANTOM5:200.1 Scaled Tags Per Million
Pig:196.0 nTPM
Mouse:234.7 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005665Antibody HPA036534
Glial cells Not detectedMedium
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 221.5
Sample id Sample description nTPM
Hippocampus
nTPM: 187.7
2529 Female, age 94, left hemisphere 230.6
2621 Female, age 67, right hemisphere 194.7
1911 Female, age 85, right hemisphere 192.4
1898 Male, age 80, left hemisphere 186.8
1855 Male, age 76, left hemisphere 172.8
2148 Female, age 91, left hemisphere 148.7
Dentate gyrus
nTPM: 185.4
2530 Female, age 94, left hemisphere 287.8
2010 Male, age 76, both hemispheres 208.2
2246 Female, age 85, both hemispheres 172.0
2528 Male, age 74, both hemispheres 160.5
2531 Female, age 67, both hemispheres 152.9
1927 Female, age 91, both hemispheres 130.8
Entorhinal gyrus
nTPM: 212.4
2686 Male, age 75, right hemisphere 228.6
2117 Female, age 91, right hemisphere 224.2
2764 Male, age 80, right hemisphere 222.9
1787 Male, age 76, left hemisphere 213.8
1938 Female, age 85, left hemisphere 198.3
2613 Female, age 94, left hemisphere 186.6
Hippocampus, CA1
nTPM: 161.6
2749 Male, age 80, left hemisphere 177.0
1873 Female, age 85, both hemispheres 176.1
2527 Male, age 74, both hemispheres 174.8
2082 Female, age 91, right hemisphere 159.7
2045 Male, age 76, both hemispheres 120.5
Hippocampus, CA2
nTPM: 194.7
1963 Male, age 80, left hemisphere 228.2
2437 Female, age 94, left hemisphere 207.1
1892 Male, age 76, both hemispheres 189.2
1940 Female, age 85, left hemisphere 189.0
2249 Male, age 74, both hemispheres 184.7
2113 Female, age 91, right hemisphere 169.8
Hippocampus, CA3
nTPM: 147.3
1891 Female, age 85, both hemispheres 217.9
1867 Male, age 76, both hemispheres 184.9
2137 Male, age 80, left hemisphere 130.1
2436 Male, age 74, both hemispheres 130.0
2861 Female, age 67, both hemispheres 113.6
2620 Female, age 94, left hemisphere 107.2
Parahippocampal cortex
nTPM: 176.9
2532 Female, age 72, left hemisphere 208.9
2018 Male, age 76, both hemispheres 200.4
2692 Male, age 74, both hemispheres 196.8
1850 Male, age 80, both hemispheres 186.5
1990 Female, age 91, right hemisphere 185.2
1933 Female, age 85, both hemispheres 177.8
2245 Female, age 91, both hemispheres 174.2
2693 Female, age 94, both hemispheres 153.3
2250 Female, age 67, right hemisphere 144.8
2622 Female, age 67, right hemisphere 141.0
Perirhinal gyrus
nTPM: 170.5
2848 Male, age 76, right hemisphere 200.2
1841 Female, age 85, right hemisphere 165.9
1794 Male, age 80, right hemisphere 165.7
1847 Female, age 91, left hemisphere 162.4
2521 Female, age 94, right hemisphere 158.1
Subiculum
nTPM: 221.5
2042 Male, age 76, both hemispheres 274.9
1901 Male, age 80, both hemispheres 243.5
2438 Female, age 94, left hemisphere 238.1
1977 Female, age 85, both hemispheres 228.6
2619 Male, age 74, both hemispheres 188.4
2729 Female, age 91, right hemisphere 155.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 259.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 259.9
Samples: 197

Max nTPM: 766.9
Min nTPM: 46.2
Std nTPM: 117.6
Median nTPM: 238.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 766.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 682.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 681.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 597.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 587.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 561.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 527.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 520.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 505.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 489.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 488.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 200.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 200.1
FF:10153-102I9 76 years, female 247.7
FF:10169-103B7 60 years, female 152.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 196.0
Pig sample Sample description nTPM
Subiculum
nTPM: 136.7
Samples: 4

Max nTPM: 161.0
Min nTPM: 119.7
Sample A Female 161.0
Sample B Female 139.4
Sample C Male 126.6
Sample D Male 119.7
Dorsal hippocampus
nTPM: 196.0
Samples: 4

Max nTPM: 255.2
Min nTPM: 133.9
Sample A Female 255.2
Sample B Female 174.6
Sample C Male 220.2
Sample D Male 133.9
Entorhinal cortex
nTPM: 154.4
Samples: 4

Max nTPM: 170.7
Min nTPM: 145.7
Sample A Female 155.0
Sample B Female 170.7
Sample C Male 146.1
Sample D Male 145.7
Ventral hippocampus
nTPM: 160.2
Samples: 4

Max nTPM: 177.6
Min nTPM: 126.0
Sample A Female 164.7
Sample B Female 126.0
Sample C Male 172.5
Sample D Male 177.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 234.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 234.7
Samples: 4

Max nTPM: 266.9
Min nTPM: 210.6
Sample A Male 243.9
Sample B Male 266.9
Sample C Female 210.6
Sample D Female 217.2
Hippocampal formation
nTPM: 201.8
Samples: 4

Max nTPM: 205.4
Min nTPM: 196.9
Sample A Male 205.4
Sample B Male 203.7
Sample C Female 201.1
Sample D Female 196.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69549619 Antisense, RP_050222_01_F03, Mouse strain C57BL/6J (56 days, male) 2.8

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