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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
410.4
nTPM
FANTOM5:
395.2
Scaled Tags Per Million
Pig:
209.2
nTPM
Allen mouse:
0.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
410.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 410.4
2188
Female, age 91, both hemispheres
492.1
2090
Male, age 80, both hemispheres
460.5
2301
Female, age 85, both hemispheres
448.0
1984
Male, age 76, both hemispheres
240.9
Dorsal cochlear nucleus nTPM: 326.2
2187
Female, age 91, both hemispheres
411.6
2802
Male, age 74, right hemisphere
352.6
2378
Male, age 80, both hemispheres
346.0
2370
Male, age 61, both hemispheres
263.4
2058
Male, age 76, both hemispheres
257.4
Dorsal tegmental nucleus nTPM: 300.4
2083
Male, age 80, both hemispheres
392.5
2326
Male, age 74, both hemispheres
334.0
2358
Male, age 61, both hemispheres
238.3
1936
Male, age 76, left hemisphere
236.7
Dorsolateral tegmental area nTPM: 307.9
2751
Female, age 85, both hemispheres
458.3
2654
Male, age 80, both hemispheres
372.4
2337
Male, age 61, both hemispheres
290.3
2360
Male, age 74, both hemispheres
224.9
2141
Male, age 76, both hemispheres
193.5
Kolliker-Fuse nucleus nTPM: 350.6
2793
Female, age 91, left hemisphere
524.8
2163
Male, age 80, both hemispheres
314.8
2315
Male, age 76, right hemisphere
212.1
Lateral lemniscal nuclei nTPM: 319.8
2320
Female, age 91, left hemisphere
422.7
2453
Male, age 74, right hemisphere
355.4
2746
Female, age 85, left hemisphere
321.2
2169
Male, age 76, both hemispheres
264.7
2036
Male, age 80, both hemispheres
234.9
Lateral parabrachial nucleus nTPM: 327.7
2792
Male, age 76, both hemispheres
459.9
2013
Male, age 80, both hemispheres
359.3
2790
Male, age 61, both hemispheres
257.4
2139
Female, age 85, right hemisphere
234.1
Lateral vestibular nucleus nTPM: 324.1
2311
Male, age 80, both hemispheres
362.2
2184
Male, age 76, both hemispheres
286.0
Locus coeruleus nTPM: 202.8
2720
Male, age 74, both hemispheres
252.1
2162
Male, age 80, both hemispheres
227.5
2317
Female, age 72, unknown
210.5
2014
Male, age 55, unknown
198.7
2123
Female, age 91, both hemispheres
192.4
2788
Male, age 74, unknown
178.2
1980
Male, age 76, both hemispheres
160.5
Medial parabrachial nucleus nTPM: 368.8
2170
Female, age 91, both hemispheres
456.4
2463
Female, age 85, right hemisphere
418.0
2854
Male, age 80, both hemispheres
360.7
2786
Male, age 76, both hemispheres
309.0
2156
Male, age 61, both hemispheres
299.7
Medial periolivary nuclei nTPM: 321.2
2458
Female, age 91, both hemispheres
411.7
2081
Male, age 80, both hemispheres
393.6
2791
Male, age 74, right hemisphere
348.5
2063
Male, age 76, both hemispheres
237.7
2171
Female, age 85, both hemispheres
214.6
Motor facial nucleus nTPM: 328.5
2365
Male, age 74, right hemisphere
388.0
2697
Female, age 85, both hemispheres
381.7
2126
Male, age 61, both hemispheres
355.5
2795
Female, age 91, both hemispheres
351.4
2327
Male, age 80, both hemispheres
292.2
2062
Male, age 76, both hemispheres
202.2
Motor trigeminal nucleus nTPM: 336.4
2321
Female, age 91, both hemispheres
415.9
2560
Male, age 74, both hemispheres
400.1
2309
Male, age 76, both hemispheres
303.9
2079
Male, age 80, both hemispheres
288.5
2335
Male, age 61, both hemispheres
273.6
Nuclei of the trapezoid body nTPM: 281.8
2368
Female, age 91, both hemispheres
372.0
2166
Male, age 80, both hemispheres
365.1
2159
Male, age 61, both hemispheres
253.1
1983
Male, age 76, both hemispheres
240.8
2735
Female, age 85, both hemispheres
178.0
Nucleus raphe magnus nTPM: 286.1
2459
Female, age 91, both hemispheres
426.1
2328
Male, age 80, both hemispheres
338.4
2455
Male, age 74, both hemispheres
312.3
2051
Male, age 76, both hemispheres
305.4
2160
Male, age 61, both hemispheres
167.1
2172
Female, age 85, both hemispheres
166.9
Paramedian reticular nucleus nTPM: 316.9
2057
Male, age 80, both hemispheres
350.3
2052
Male, age 76, both hemispheres
347.1
2050
Female, age 85, both hemispheres
322.3
2313
Male, age 61, both hemispheres
247.9
Pedunculopontine tegmental nucleus nTPM: 285.6
2334
Male, age 80, both hemispheres
324.9
2338
Male, age 61, both hemispheres
268.8
1921
Female, age 85, both hemispheres
263.1
Pontine nuclei nTPM: 357.6
2454
Male, age 74, left hemisphere
483.8
2319
Female, age 91, both hemispheres
476.0
2109
Female, age 72, unknown
418.1
2115
Male, age 80, left hemisphere
350.7
1863
Male, age 55, unknown
350.0
1968
Male, age 76, left hemisphere
309.9
2787
Female, age 85, both hemispheres
244.0
2727
Male, age 61, right hemisphere
228.6
Pontine raphe nucleus nTPM: 227.9
2122
Female, age 85, midline
228.4
2853
Male, age 76, midline
227.5
Posteroventral cochlear nucleus nTPM: 386.4
2135
Female, age 91, both hemispheres
554.0
2341
Male, age 80, both hemispheres
490.4
2070
Male, age 76, both hemispheres
331.7
2371
Male, age 61, both hemispheres
285.9
2752
Female, age 85, both hemispheres
270.0
Principal sensory trigeminal nucleus nTPM: 304.8
2367
Female, age 91, left hemisphere
498.9
2324
Male, age 76, both hemispheres
263.7
2008
Male, age 80, left hemisphere
261.7
2158
Male, age 61, both hemispheres
194.8
Reticular pontine nucleus, caudal nTPM: 377.7
2457
Female, age 91, both hemispheres
461.1
2559
Male, age 74, both hemispheres
451.6
2092
Male, age 76, both hemispheres
323.8
2332
Male, age 80, right hemisphere
274.1
Reticular pontine nucleus, oral nTPM: 407.5
2361
Male, age 74, both hemispheres
498.3
2366
Female, age 91, both hemispheres
484.4
1939
Male, age 80, both hemispheres
388.9
2012
Female, age 85, both hemispheres
336.3
2167
Male, age 76, both hemispheres
329.5
Reticulotegmental nucleus nTPM: 317.1
2322
Female, age 91, both hemispheres
385.4
2452
Male, age 74, both hemispheres
359.7
2333
Male, age 80, both hemispheres
325.6
2325
Male, age 76, both hemispheres
197.6
Spinal trigeminal nucleus, oral nTPM: 300.0
2164
Male, age 80, both hemispheres
368.2
1978
Male, age 76, both hemispheres
278.1
2737
Female, age 85, both hemispheres
253.8
Subcoeruleus area nTPM: 324.2
2369
Female, age 85, left hemisphere
508.5
1958
Male, age 80, both hemispheres
305.8
2451
Male, age 74, both hemispheres
287.1
2089
Male, age 76, left hemisphere
269.8
2323
Female, age 91, left hemisphere
250.0
Superior olive nTPM: 362.4
2364
Male, age 74, right hemisphere
383.2
2020
Male, age 76, both hemispheres
378.3
2329
Male, age 80, right hemisphere
376.9
2561
Female, age 91, both hemispheres
370.2
1875
Female, age 85, both hemispheres
303.2
Ventral periolivary nuclei nTPM: 308.7
2023
Male, age 76, both hemispheres
410.6
2794
Female, age 91, left hemisphere
306.3
2165
Male, age 80, both hemispheres
296.9
2130
Female, age 85, both hemispheres
221.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 342.6
2456
Female, age 91, both hemispheres
430.8
2840
Female, age 85, both hemispheres
382.8
2449
Male, age 74, both hemispheres
346.9
2161
Male, age 80, both hemispheres
313.7
1959
Male, age 76, both hemispheres
301.6
2359
Male, age 61, both hemispheres
280.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
209.2
Pig sample
Sample description
nTPM
Pons nTPM: 209.2
Samples: 4
Max nTPM: 301.6
Min nTPM: 160.7
Sample A
Female
175.7
Sample B
Female
160.7
Sample C
Male
198.8
Sample D
Male
301.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
