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DCBLD1
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                                  • SUMMARY

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                                  • DCBLD1
                                  PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
                                  RNA SUMMARY - Normalized
                                  Tissue consensus dataseti

                                  The consensus dataset consists of normalized expression (nTPM) levels for 55 tissue types, created by combining the HPA and GTEx transcriptomics datasets using the internal normalization pipeline. Color-coding is based on tissue groups, each consisting of tissues with functional features in common. To access sample data, click on tissue name or bar.

                                  Read more about how the datasets were combined into consensus normalized expression levels in Assays & annotation.

                                  Cerebral cortexCerebellumBasal gangliaHypothalamusMidbrainAmygdalaChoroid plexusHippocampal formationSpinal cordRetinaThyroid glandParathyroid glandAdrenal glandPituitary glandLungSalivary glandEsophagusTongueStomachDuodenumSmall intestineColonRectumLiverGallbladderPancreasKidneyUrinary bladderTestisEpididymisSeminal vesicleProstateVaginaOvaryFallopian tubeEndometriumCervixPlacentaBreastHeart muscleSmooth muscleSkeletal muscleAdipose tissueSkinAppendixSpleenLymph nodeTonsilBone marrowThymus0246810nTPM
                                  Single cell typei

                                  A summary of normalized single cell RNA (nTPM) from all single cell types. Color-coding is based on cell type groups, each consisting of cell types with functional features in common.

                                  Ciliated cellsBasal respiratory cellsClub cellsIonocytesMucus glandular cellsSerous glandular cellsGastric mucus-secreting cellsProximal enterocytesPaneth cellsDistal enterocytesIntestinal goblet cellsExocrine glandular cellsBasal prostatic cellsProstatic glandular cellsBreast glandular cellsBreast myoepithelial cellsGlandular and luminal cellsSecretory cellsBasal keratinocytesSuprabasal keratinocytesBasal squamous epithelial cellsSquamous epithelial cellsAlveolar cells type 1Alveolar cells type 2Salivary duct cellsDuctal cellsHepatocytesCholangiocytesProximal tubular cellsDistal tubular cellsCollecting duct cellsMesothelial cellsSertoli cellsGranulosa cellsEnteroendocrine cellsPancreatic endocrine cellsLeydig cellsExcitatory neuronsInhibitory neuronsCone photoreceptor cellsRod photoreceptor cellsBipolar cellsHorizontal cellsAstrocytesOligodendrocyte precursor cellsOligodendrocytesMicroglial cellsMuller glia cellsSchwann cellsSpermatogoniaSpermatocytesEarly spermatidsLate spermatidsOocytesCytotrophoblastsSyncytiotrophoblastsExtravillous trophoblastsEndothelial cellsLymphatic endothelial cellsCardiomyocytesSkeletal myocytesSmooth muscle cellsAdipocytesMelanocytesFibroblastsPeritubular cellsEndometrial stromal cellsOvarian stromal cellsUndifferentiated cellsT-cellsB-cellsPlasma cellsNk-cellsGranulocytesMonocytesMacrophagesHofbauer cellsKupffer cellsDendritic cellsLangerhans cellsErythroid cells010203040nTPM
                                  Brain regional consensus dataseti

                                  Consensus normalized expression (nTPM) levels were created for the 13 brain regions based on the HPA brain transcriptomics dataset. Color-coding is based on the brain region, in several cases consisting of the highest expression among the subregions included. To access sample data, click on region name or bar.

                                  Read more about normalization of transcriptomics data in<a href="/about/assays+annotation#normalization_rna"_blank">Assays & Annotation.

                                  Cerebral cortexHippocampal formationAmygdalaBasal gangliaThalamusHypothalamusMidbrainCerebellumPonsMedulla oblongataSpinal cordWhite matterChoroid plexus0246810nTPM
                                  HPA immune cell dataseti

                                  The resulting transcript expression values calculated as nTPM, resulting from the internal normalization pipeline for 18 immune cell types and total peripheral blood mononuclear cells (PBMC).

                                  BasophilEosinophilNeutrophilClassical monocyteNon-classical monocyteIntermediate monocyteT-regGdT-cellMAIT T-cellMemory CD4 T-cellNaive CD4 T-cellMemory CD8 T-cellNaive CD8 T-cellMemory B-cellNaive B-cellPlasmacytoid DCMyeloid DCNK-cellTotal PBMC0246810nTPM
                                  HPA cell linesi

                                  The cell lines in the Human Protein Atlas have been analyzed by RNA-seq to estimate the transcript abundance of each protein-coding gene. The RNA-seq data was then used to classify all genes according to their cell line-specific expression into one of six different categories, defined based on the total set of all nTPM values in all analyzed cell lines.

                                  Adrenocortical cancerBile duct cancerBladder cancerBone cancerBrain cancerBreast cancerCervical cancerColorectal cancerEsophageal cancerGallbladder cancerGastric cancerHead and Neck cancerKidney cancerLeukemiaLiver cancerLung cancerLymphomaMyelomaNeuroblastomaNon-cancerousOvarian cancerPancreatic cancerProstate cancerRhabdoidSarcomaSkin cancerTestis cancerThyroid cancerUncategorizedUterine cancer010203040nTPM

                                  RNA SAMPLE SUMMARYi

                                  The RNA summary section shows normal distribution of individual samples across the datasets of multiple RNA-seq analyses visualized with box plots shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range.

                                  Hold mouse pointer over tissue/cell type/cell line to see sample numbers. Click on the cancer type to see cancer type sample information.

                                  HPA tissue dataset
                                  0.01.02.03.04.05.06.07.08.09.010.011.012.0nTPMLungSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumAppendixLiverGallbladderPancreasThyroid glandParathyroid glandAdrenal glandKidneyUrinary bladderSkinOvaryFallopian tubeEndometriumCervixPlacentaBreastTestisEpididymisSeminal vesicleProstateCerebral cortexSpleenLymph nodeTonsilBone marrowHeart muscleSmooth muscleSkeletal muscleChoroid plexusAdipose tissueThymusTongue
                                  GTEx tissue dataset
                                  0.05.010.015.020.025.030.0nTPMRetinaLungSalivary glandEsophagusStomachSmall intestineColonLiverPancreasThyroid glandAdrenal glandKidneyUrinary bladderVaginaSkinOvaryFallopian tubeEndometriumCervixBreastTestisProstateCerebral cortexCerebellumHippocampusCaudateSpleenHeart muscleSkeletal muscleAmygdalaNucleus accumbensPutamenSubstantia nigraAdipose tissueHypothalamusPituitary glandSpinal cord
                                  FANTOM5 tissue dataset
                                  0.02.04.06.08.010.012.014.016.018.020.022.024.026.028.0Scaled Tags Per MillionLungSalivary glandEsophagusSmall intestineColonAppendixLiverGallbladderPancreasThyroid glandKidneyUrinary bladderVaginaOvaryEndometriumCervixPlacentaBreastTestisEpididymisSeminal vesicleProstateCerebellumHippocampusCaudateSpleenLymph nodeTonsilHeart muscleSmooth muscleSkeletal muscleAmygdalaLocus coeruleusNucleus accumbensOccipital cortexPostcentral gyrusPutamenSubstantia nigraAdipose tissueCorpus callosumDuctus deferensFrontal lobeGlobus pallidusInsular cortexMedial frontal gyrusMedial temporal gyrusMedulla oblongataOccipital lobeOccipital poleOlfactory bulbParacentral gyrusParietal lobePituitary glandPonsRetinaSpinal cordTemporal cortexThalamusThymusTongue
                                  HPA immune cell dataset
                                  0.00.51.01.52.02.53.0nTPMBasophilClassical monocyteEosinophilGdT-cellIntermediate monocyteMAIT T-cellMemory B-cellMemory CD4 T-cellMemory CD8 T-cellMyeloid DCNaive B-cellNaive CD4 T-cellNaive CD8 T-cellNeutrophilNK-cellNon-classical monocytePlasmacytoid DCT-regTotal PBMC
                                  Monaco immune cell dataset
                                  0.01.02.03.04.05.06.07.08.0nTPMBasophilCentral memory CD8 T-cellClassical monocyteEffector memory CD8 T-cellExhausted memory B-cellIntermediate monocyteMAIT T-cellMemory CD4 T-cell TFHMemory CD4 T-cell Th1Memory CD4 T-cell Th1/Th17Memory CD4 T-cell Th17Memory CD4 T-cell Th2Myeloid DCNaive B-cellNaive CD4 T-cellNaive CD8 T-cellNeutrophilNK-cellNon-classical monocyteNon-switched memory B-cellNon-Vd2 gdTCRPlasmablastPlasmacytoid DCProgenitor cellSwitched memory B-cellT-regTerminal effector memory CD4 T-cellTerminal effector memory CD8 T-cellTotal PBMCVd2 gdTCR
                                  Schmiedel immune cell dataset
                                  0.02.04.06.08.010.012.014.0TPMClassical monocyteMemory CD4 T-cell TFHMemory CD4 T-cell Th1Memory CD4 T-cell Th1/Th17Memory CD4 T-cell Th17Memory CD4 T-cell Th2Memory T-regNaive B-cellNaive CD4 T-cellNaive CD4 T-cell activatedNaive CD8 T-cellNaive CD8 T-cell activatedNaive T-regNK-cellNon-classical monocyte
                                  Pig brain dataset
                                  0.00.51.01.52.02.53.03.54.04.55.05.56.06.5nTPMCerebellumCaudateAmygdalaOccipital cortexPutamenRetrosplenial cortexSubiculumSubstantia nigraCingulate cortexCorpus callosumDorsal hippocampus Dorsal spinal cordEntorhinal cortexHypothalamusInsular cortexMedulla oblongataMidbrainMotor cortexOlfactory bulbPeriaqueductal grayPituitary glandPonsPrefrontal cortexRetinaSeptumSomatosensory cortexSuperior colliculiTemporal cortexThalamusVentral hippocampus Ventral pallidumVentral spinal cord
                                  Mouse brain dataset
                                  0.01.02.03.04.05.06.07.08.09.010.011.0nTPMAmygdalaCaudate putamenCerebellumCorpus callosumEntorhinal cortexFrontal cortexHippocampal formationHypothalamusMidbrainOccipital cortexOlfactory bulbPituitary glandPons and medullaRetinaRetrosplenial and cingulate cortexSeptumSomatosensory cortexThalamusVentral forebrain
                                  Allen mouse brain dataset
                                  0.00.10.10.10.20.30.30.30.4Expression energyCerebellumPonsOlfactory bulbHypothalamusThalamusHippocampal formationMidbrainMedulla oblongataStriatumCortical subplatePallidum
                                  Cell line dataset
                                  0.05.010.015.020.025.030.035.040.045.050.055.060.065.0nTPMA-431A-549AF22ASC52teloBJ [Human fibroblast]CACO-2EFO-21FHDF/TERT166GAMGHaCaTHAP1HBEC3-KTHBF/TERT88HDLM-2HEK293HELHeLaHep-G2HTCEpiHTEC/SVTERT24-BHTERT-HME1HTERT-RPE1HUVEC/TERT2JURKATK-562LHCN-M2MCF-7NB4OE19PC-3REHRh30RPTEC/TERT1RT-4SH-SY5YSiHaSK-MEL-30SuSaTHP-1U-251MGU2OS
                                  TCGA dataset
                                  0.010.020.030.040.050.060.070.080.090.0100.0110.0FPKMGliomaThyroid cancerLung cancerColorectal cancerHead and neck cancerStomach cancerLiver cancerPancreatic cancerRenal cancerUrothelial cancerProstate cancerTestis cancerBreast cancerCervical cancerEndometrial cancerOvarian cancerMelanoma

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