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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.4
nTPM
HPA Brain:
23.9
nTPM
GTEx:
37.4
nTPM
FANTOM5:
66.2
Scaled Tags Per Million
Pig:
37.9
nTPM
Mouse:
33.7
nTPM
Allen mouse:
1.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
23.9
Sample id
Sample description
nTPM
Amygdala nTPM: 23.9
2514
Male, age 75, right hemisphere
27.8
2695
Female, age 67, right hemisphere
23.6
2814
Male, age 76, right hemisphere
23.4
2517
Female, age 94, left hemisphere
22.9
1987
Female, age 91, left hemisphere
22.0
Basal amygdala nTPM: 20.0
1955
Male, age 76, both hemispheres
22.4
2110
Male, age 80, left hemisphere
22.2
2827
Female, age 67, right hemisphere
21.1
2685
Female, age 94, left hemisphere
19.4
2609
Male, age 75, right hemisphere
17.8
2243
Female, age 91, right hemisphere
17.3
Central amygdala nTPM: 21.9
2701
Female, age 91, right hemisphere
24.3
2515
Male, age 75, right hemisphere
23.6
2239
Male, age 80, left hemisphere
21.9
1905
Male, age 76, both hemispheres
21.2
2826
Female, age 94, left hemisphere
18.5
Corticomedial amygdala nTPM: 21.7
2429
Female, age 94, left hemisphere
25.1
2428
Male, age 75, right hemisphere
23.6
2240
Male, age 76, both hemispheres
21.3
2242
Female, age 91, right hemisphere
20.7
2829
Male, age 80, left hemisphere
20.5
2535
Female, age 67, right hemisphere
19.2
Lateral amygdala nTPM: 22.1
2830
Female, age 67, right hemisphere
24.9
2516
Male, age 75, right hemisphere
24.3
1883
Male, age 76, both hemispheres
22.6
2255
Female, age 91, right hemisphere
21.5
2534
Female, age 94, left hemisphere
20.7
2256
Male, age 80, left hemisphere
18.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
37.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 37.4
Samples: 152
Max nTPM: 61.0
Min nTPM: 19.0
Std nTPM: 8.7
Median nTPM: 36.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
61.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
60.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
59.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
57.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
55.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
55.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
55.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
54.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
54.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
52.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
52.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
51.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
51.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
51.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
51.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
50.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
50.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
49.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
49.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
49.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
48.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
47.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
47.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
46.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
46.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
46.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
45.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
44.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
44.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
43.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
43.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
43.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
43.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
43.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
42.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
42.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
42.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
41.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
41.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
41.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
41.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
40.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
40.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
40.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
40.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
40.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
40.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
40.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
40.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
39.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
39.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
39.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
39.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
39.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
38.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
38.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
38.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
38.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
38.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
37.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
37.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
37.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
37.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
37.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
37.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
36.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
36.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
36.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
36.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
36.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
36.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
36.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
36.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
35.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
35.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
35.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
35.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
35.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
34.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
34.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
34.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
34.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
34.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
34.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
34.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
34.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
34.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
34.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
33.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
33.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
33.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
33.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
33.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
33.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
32.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
32.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
32.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
32.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
32.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
32.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
32.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
32.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
32.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
32.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
31.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
31.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
31.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
31.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
31.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
30.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
30.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
30.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
30.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
30.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
30.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
29.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
29.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
29.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
29.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
28.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
28.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
28.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
27.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
27.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
26.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
26.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
26.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
26.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
25.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
25.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
25.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
25.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
25.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
25.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
25.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
24.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
23.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
23.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
23.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
21.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
19.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
33.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 33.7
Samples: 4
Max nTPM: 35.9
Min nTPM: 27.9
Sample A
Male
27.9
Sample B
Male
35.7
Sample C
Female
35.9
Sample D
Female
35.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
