HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:6.6 nTPM
HPA Brain:57.7 nTPM
GTEx:6.6 nTPM
FANTOM5:53.8 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:15.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017998Antibody HPA018864
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.7
Sample id Sample description nTPM
Hippocampus
nTPM: 50.5
2621 Female, age 67, right hemisphere 56.8
2148 Female, age 91, left hemisphere 54.4
1855 Male, age 76, left hemisphere 52.8
2529 Female, age 94, left hemisphere 50.4
1898 Male, age 80, left hemisphere 44.8
1911 Female, age 85, right hemisphere 44.0
Dentate gyrus
nTPM: 51.8
2531 Female, age 67, both hemispheres 65.7
2010 Male, age 76, both hemispheres 53.5
2530 Female, age 94, left hemisphere 51.9
2528 Male, age 74, both hemispheres 47.8
1927 Female, age 91, both hemispheres 46.6
2246 Female, age 85, both hemispheres 45.3
Entorhinal gyrus
nTPM: 55.4
2613 Female, age 94, left hemisphere 61.1
2686 Male, age 75, right hemisphere 58.4
2764 Male, age 80, right hemisphere 57.2
1787 Male, age 76, left hemisphere 54.6
1938 Female, age 85, left hemisphere 51.5
2117 Female, age 91, right hemisphere 49.5
Hippocampus, CA1
nTPM: 49.2
2749 Male, age 80, left hemisphere 56.5
2045 Male, age 76, both hemispheres 50.8
2082 Female, age 91, right hemisphere 47.1
2527 Male, age 74, both hemispheres 46.1
1873 Female, age 85, both hemispheres 45.4
Hippocampus, CA2
nTPM: 45.2
1963 Male, age 80, left hemisphere 52.8
2437 Female, age 94, left hemisphere 51.2
2113 Female, age 91, right hemisphere 44.9
1892 Male, age 76, both hemispheres 44.6
2249 Male, age 74, both hemispheres 40.2
1940 Female, age 85, left hemisphere 37.7
Hippocampus, CA3
nTPM: 57.7
2620 Female, age 94, left hemisphere 78.5
2861 Female, age 67, both hemispheres 74.2
2137 Male, age 80, left hemisphere 56.5
1867 Male, age 76, both hemispheres 49.8
1891 Female, age 85, both hemispheres 44.8
2436 Male, age 74, both hemispheres 42.5
Parahippocampal cortex
nTPM: 49.8
2622 Female, age 67, right hemisphere 55.7
2532 Female, age 72, left hemisphere 53.8
2245 Female, age 91, both hemispheres 51.4
2693 Female, age 94, both hemispheres 49.6
2692 Male, age 74, both hemispheres 49.0
2018 Male, age 76, both hemispheres 48.9
1933 Female, age 85, both hemispheres 48.2
1850 Male, age 80, both hemispheres 47.3
1990 Female, age 91, right hemisphere 47.0
2250 Female, age 67, right hemisphere 46.6
Perirhinal gyrus
nTPM: 49.5
2521 Female, age 94, right hemisphere 52.7
2848 Male, age 76, right hemisphere 51.3
1794 Male, age 80, right hemisphere 50.7
1847 Female, age 91, left hemisphere 47.8
1841 Female, age 85, right hemisphere 45.1
Subiculum
nTPM: 47.9
2042 Male, age 76, both hemispheres 50.2
1977 Female, age 85, both hemispheres 49.5
1901 Male, age 80, both hemispheres 48.7
2729 Female, age 91, right hemisphere 48.6
2619 Male, age 74, both hemispheres 47.6
2438 Female, age 94, left hemisphere 42.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.6
Samples: 197

Max nTPM: 13.2
Min nTPM: 2.9
Std nTPM: 1.5
Median nTPM: 6.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 13.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 13.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 12.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 11.1
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 10.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 9.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 9.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 9.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 9.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 9.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 9.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.8
FF:10153-102I9 76 years, female 73.3
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.0
Pig sample Sample description nTPM
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.1
Sample A Female 19.9
Sample B Female 14.8
Sample C Male 15.6
Sample D Male 13.1
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 12.8
Sample A Female 19.0
Sample B Female 17.9
Sample C Male 14.5
Sample D Male 12.8
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 19.1
Min nTPM: 13.3
Sample A Female 16.1
Sample B Female 13.3
Sample C Male 19.1
Sample D Male 13.6
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 22.1
Min nTPM: 12.6
Sample A Female 14.0
Sample B Female 12.6
Sample C Male 22.1
Sample D Male 19.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.6
Sample A Male 12.0
Sample B Male 11.4
Sample C Female 10.6
Sample D Female 13.7
Hippocampal formation
nTPM: 15.2
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.9
Sample A Male 11.9
Sample B Male 17.6
Sample C Female 17.4
Sample D Female 13.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
73497147 Antisense, RP_051121_01_A09, Mouse strain C57BL/6J (56 days, male) 2.6

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