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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
153.2
nTPM
HPA Brain:
193.4
nTPM
GTEx:
153.2
nTPM
FANTOM5:
12.5
Scaled Tags Per Million
Pig:
179.6
nTPM
Mouse:
84.6
nTPM
Allen mouse:
0.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
193.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 169.2
2828
Female, age 72, unknown
205.2
2586
Male, age 75, left hemisphere
192.5
1833
Male, age 53, unknown
187.5
2666
Male, age 74, left hemisphere
182.9
2411
Female, age 72, unknown
182.5
1830
Male, age 51, unknown
170.5
2019
Male, age 18, unknown
170.4
1827
Male, age 72, unknown
154.5
1870
Female, age 42, unknown
152.2
2219
Male, age 76, both hemispheres
94.0
Dorsal raphe nucleus nTPM: 140.5
2750
Male, age 76, both hemispheres
170.7
2016
Female, age 72, unknown
157.1
1828
Male, age 53, unknown
134.7
2298
Female, age 72, unknown
123.7
2047
Male, age 72, unknown
116.1
Inferior colliculus nTPM: 120.1
1848
Female, age 42, unknown
129.6
2849
Male, age 72, unknown
124.9
1890
Male, age 53, unknown
113.1
2097
Female, age 72, unknown
112.7
Median raphe nucleus nTPM: 111.7
2220
Male, age 76, midline
111.7
Periaquaductal grey, anterior nTPM: 147.1
2502
Female, age 75, unknown
171.6
1795
Male, age 51, unknown
137.8
1947
Male, age 18, unknown
131.8
Periaquaductal grey, dorsal nTPM: 124.3
2464
Female, age 72, unknown
143.2
2850
Male, age 76, both hemispheres
136.1
1831
Male, age 72, unknown
114.9
1840
Male, age 53, unknown
103.1
Periaquaductal grey, lateral nTPM: 123.1
2140
Male, age 76, both hemispheres
134.0
2053
Male, age 18, unknown
120.5
2272
Male, age 74, both hemispheres
114.8
Pretectal area nTPM: 129.1
2316
Male, age 76, right hemisphere
160.3
1815
Male, age 53, unknown
158.6
1817
Female, age 42, unknown
140.5
2007
Male, age 72, unknown
137.7
2825
Male, age 18, unknown
129.6
2407
Male, age 75, both hemispheres
127.6
2667
Female, age 75, unknown
126.0
1816
Male, age 51, unknown
123.9
2224
Female, age 72, unknown
109.5
2273
Male, age 74, both hemispheres
104.3
1944
Female, age 72, unknown
101.8
Red nucleus nTPM: 193.4
1904
Male, age 53, unknown
226.6
2769
Male, age 72, unknown
220.4
2503
Female, age 72, unknown
218.9
2227
Male, age 72, unknown
213.3
2785
Male, age 18, unknown
200.4
2823
Male, age 76, right hemisphere
193.4
1821
Female, age 72, unknown
190.3
2588
Male, age 74, left hemisphere
180.3
1865
Male, age 51, unknown
174.4
2725
Female, age 75, unknown
172.5
1954
Female, age 42, unknown
170.2
2584
Male, age 75, left hemisphere
159.9
Substantia nigra nTPM: 131.5
1851
Male, age 51, unknown
158.2
2590
Female, age 75, unknown
143.7
2699
Male, age 18, unknown
142.9
1889
Female, age 72, unknown
137.2
2583
Male, age 75, right hemisphere
134.8
1916
Female, age 42, unknown
131.0
2409
Female, age 72, unknown
129.9
2665
Male, age 74, both hemispheres
126.5
1941
Male, age 53, unknown
111.8
2241
Male, age 72, unknown
98.6
Superior colliculus nTPM: 151.7
1995
Male, age 72, unknown
192.1
2664
Male, age 75, both hemispheres
161.1
1913
Female, age 42, unknown
159.6
2587
Male, age 74, left hemisphere
157.2
1796
Male, age 53, unknown
154.7
1895
Male, age 76, right hemisphere
151.6
1839
Male, age 51, unknown
149.1
2261
Male, age 18, unknown
143.1
2668
Female, age 75, unknown
131.4
2087
Female, age 72, unknown
117.2
Ventral tegmental area nTPM: 139.9
2410
Female, age 72, unknown
188.7
1915
Female, age 42, unknown
135.9
1942
Male, age 51, unknown
135.0
2223
Female, age 72, unknown
132.6
2021
Male, age 53, unknown
124.1
2218
Male, age 76, both hemispheres
123.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
153.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 153.2
Samples: 139
Max nTPM: 442.0
Min nTPM: 49.9
Std nTPM: 63.7
Median nTPM: 141.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
442.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
425.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
352.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
311.9
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
285.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
273.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
267.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
263.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
263.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
254.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
242.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
240.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
238.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
227.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
225.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
225.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
223.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
219.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
218.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
216.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
215.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
215.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
208.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
205.4
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
204.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
201.9
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
200.3
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
199.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
193.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
191.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
188.0
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
188.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
187.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
181.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
180.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
179.3
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
179.3
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
175.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
172.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
170.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
169.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
167.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
163.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
163.6
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
163.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
162.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
162.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
160.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
159.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
159.2
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
159.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
156.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
154.3
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
154.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
154.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
152.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
151.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
150.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
150.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
149.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
146.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
146.5
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
146.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
145.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
145.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
144.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
144.3
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
142.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
141.1
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
141.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
139.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
139.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
139.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
138.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
138.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
136.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
135.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
135.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
135.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
133.8
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
133.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
131.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
130.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
130.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
129.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
124.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
123.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
123.3
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
121.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
121.1
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
121.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
119.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
117.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
117.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
114.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
113.9
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
113.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
111.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
111.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
111.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
109.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
109.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
108.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
108.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
107.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
106.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
105.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
105.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
103.2
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
103.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
102.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
102.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
101.8
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
101.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
101.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
99.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
97.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
97.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
96.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
96.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
95.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
94.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
94.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
92.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
92.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
91.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
89.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
88.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
88.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
88.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
86.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
85.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
84.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
82.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
73.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
68.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
66.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
62.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
49.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
84.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 84.6
Samples: 4
Max nTPM: 112.8
Min nTPM: 63.1
Sample A
Male
112.8
Sample B
Male
83.5
Sample C
Female
63.1
Sample D
Female
79.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.