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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
162.4
nTPM
FANTOM5:
18.7
Scaled Tags Per Million
Pig:
190.6
nTPM
Allen mouse:
0.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
162.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 130.3
2188
Female, age 91, both hemispheres
159.9
2090
Male, age 80, both hemispheres
133.3
2301
Female, age 85, both hemispheres
131.5
1984
Male, age 76, both hemispheres
96.6
Dorsal cochlear nucleus nTPM: 162.4
2802
Male, age 74, right hemisphere
190.5
2378
Male, age 80, both hemispheres
177.8
2370
Male, age 61, both hemispheres
165.3
2187
Female, age 91, both hemispheres
141.9
2058
Male, age 76, both hemispheres
136.6
Dorsal tegmental nucleus nTPM: 146.2
2083
Male, age 80, both hemispheres
174.5
2326
Male, age 74, both hemispheres
148.7
1936
Male, age 76, left hemisphere
140.2
2358
Male, age 61, both hemispheres
121.4
Dorsolateral tegmental area nTPM: 129.1
2654
Male, age 80, both hemispheres
163.4
2751
Female, age 85, both hemispheres
153.8
2360
Male, age 74, both hemispheres
118.0
2141
Male, age 76, both hemispheres
113.3
2337
Male, age 61, both hemispheres
97.0
Kolliker-Fuse nucleus nTPM: 160.0
2793
Female, age 91, left hemisphere
201.8
2315
Male, age 76, right hemisphere
140.6
2163
Male, age 80, both hemispheres
137.6
Lateral lemniscal nuclei nTPM: 137.5
2320
Female, age 91, left hemisphere
181.6
2746
Female, age 85, left hemisphere
135.8
2036
Male, age 80, both hemispheres
131.0
2453
Male, age 74, right hemisphere
120.0
2169
Male, age 76, both hemispheres
119.0
Lateral parabrachial nucleus nTPM: 148.4
2792
Male, age 76, both hemispheres
177.9
2013
Male, age 80, both hemispheres
173.4
2139
Female, age 85, right hemisphere
132.5
2790
Male, age 61, both hemispheres
109.7
Lateral vestibular nucleus nTPM: 141.7
2311
Male, age 80, both hemispheres
144.0
2184
Male, age 76, both hemispheres
139.4
Locus coeruleus nTPM: 113.0
2317
Female, age 72, unknown
141.9
2162
Male, age 80, both hemispheres
126.7
1980
Male, age 76, both hemispheres
120.4
2720
Male, age 74, both hemispheres
116.9
2014
Male, age 55, unknown
111.7
2123
Female, age 91, both hemispheres
98.4
2788
Male, age 74, unknown
74.6
Medial parabrachial nucleus nTPM: 132.9
2463
Female, age 85, right hemisphere
158.6
2170
Female, age 91, both hemispheres
132.6
2786
Male, age 76, both hemispheres
131.7
2156
Male, age 61, both hemispheres
124.6
2854
Male, age 80, both hemispheres
117.0
Medial periolivary nuclei nTPM: 123.9
2081
Male, age 80, both hemispheres
166.5
2458
Female, age 91, both hemispheres
149.1
2063
Male, age 76, both hemispheres
124.1
2791
Male, age 74, right hemisphere
90.3
2171
Female, age 85, both hemispheres
89.7
Motor facial nucleus nTPM: 131.6
2327
Male, age 80, both hemispheres
162.5
2126
Male, age 61, both hemispheres
139.7
2795
Female, age 91, both hemispheres
135.7
2062
Male, age 76, both hemispheres
124.4
2697
Female, age 85, both hemispheres
124.2
2365
Male, age 74, right hemisphere
103.3
Motor trigeminal nucleus nTPM: 137.4
2321
Female, age 91, both hemispheres
170.2
2560
Male, age 74, both hemispheres
151.0
2309
Male, age 76, both hemispheres
130.9
2079
Male, age 80, both hemispheres
119.1
2335
Male, age 61, both hemispheres
115.6
Nuclei of the trapezoid body nTPM: 128.9
2166
Male, age 80, both hemispheres
156.6
2368
Female, age 91, both hemispheres
155.4
1983
Male, age 76, both hemispheres
128.7
2159
Male, age 61, both hemispheres
123.0
2735
Female, age 85, both hemispheres
81.0
Nucleus raphe magnus nTPM: 140.9
2459
Female, age 91, both hemispheres
221.1
2328
Male, age 80, both hemispheres
171.8
2051
Male, age 76, both hemispheres
156.2
2160
Male, age 61, both hemispheres
111.0
2455
Male, age 74, both hemispheres
94.0
2172
Female, age 85, both hemispheres
91.5
Paramedian reticular nucleus nTPM: 122.2
2057
Male, age 80, both hemispheres
137.9
2313
Male, age 61, both hemispheres
136.9
2050
Female, age 85, both hemispheres
115.6
2052
Male, age 76, both hemispheres
98.4
Pedunculopontine tegmental nucleus nTPM: 116.0
2334
Male, age 80, both hemispheres
157.2
1921
Female, age 85, both hemispheres
114.9
2338
Male, age 61, both hemispheres
75.7
Pontine nuclei nTPM: 138.4
2115
Male, age 80, left hemisphere
158.5
2319
Female, age 91, both hemispheres
156.6
1968
Male, age 76, left hemisphere
146.4
2454
Male, age 74, left hemisphere
137.5
2727
Male, age 61, right hemisphere
134.2
1863
Male, age 55, unknown
127.3
2109
Female, age 72, unknown
124.5
2787
Female, age 85, both hemispheres
122.3
Pontine raphe nucleus nTPM: 124.3
2853
Male, age 76, midline
125.3
2122
Female, age 85, midline
123.4
Posteroventral cochlear nucleus nTPM: 144.2
2371
Male, age 61, both hemispheres
166.3
2135
Female, age 91, both hemispheres
163.0
2341
Male, age 80, both hemispheres
134.6
2070
Male, age 76, both hemispheres
129.3
2752
Female, age 85, both hemispheres
127.9
Principal sensory trigeminal nucleus nTPM: 129.9
2367
Female, age 91, left hemisphere
162.8
2324
Male, age 76, both hemispheres
147.5
2158
Male, age 61, both hemispheres
105.4
2008
Male, age 80, left hemisphere
103.9
Reticular pontine nucleus, caudal nTPM: 157.5
2457
Female, age 91, both hemispheres
194.8
2332
Male, age 80, right hemisphere
157.9
2092
Male, age 76, both hemispheres
141.2
2559
Male, age 74, both hemispheres
136.0
Reticular pontine nucleus, oral nTPM: 136.7
2366
Female, age 91, both hemispheres
171.2
1939
Male, age 80, both hemispheres
143.1
2167
Male, age 76, both hemispheres
136.1
2012
Female, age 85, both hemispheres
131.4
2361
Male, age 74, both hemispheres
101.6
Reticulotegmental nucleus nTPM: 159.9
2452
Male, age 74, both hemispheres
179.1
2322
Female, age 91, both hemispheres
178.2
2333
Male, age 80, both hemispheres
176.5
2325
Male, age 76, both hemispheres
105.6
Spinal trigeminal nucleus, oral nTPM: 124.3
2164
Male, age 80, both hemispheres
141.8
1978
Male, age 76, both hemispheres
124.2
2737
Female, age 85, both hemispheres
106.8
Subcoeruleus area nTPM: 133.7
2369
Female, age 85, left hemisphere
169.2
2451
Male, age 74, both hemispheres
151.1
2089
Male, age 76, left hemisphere
119.7
1958
Male, age 80, both hemispheres
116.4
2323
Female, age 91, left hemisphere
112.2
Superior olive nTPM: 127.6
2329
Male, age 80, right hemisphere
155.2
2561
Female, age 91, both hemispheres
153.9
2020
Male, age 76, both hemispheres
132.4
1875
Female, age 85, both hemispheres
102.3
2364
Male, age 74, right hemisphere
94.3
Ventral periolivary nuclei nTPM: 108.6
2165
Male, age 80, both hemispheres
130.8
2023
Male, age 76, both hemispheres
121.1
2794
Female, age 91, left hemisphere
105.9
2130
Female, age 85, both hemispheres
76.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 138.9
2456
Female, age 91, both hemispheres
194.3
2161
Male, age 80, both hemispheres
156.1
2840
Female, age 85, both hemispheres
133.3
1959
Male, age 76, both hemispheres
118.2
2359
Male, age 61, both hemispheres
116.7
2449
Male, age 74, both hemispheres
114.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
190.6
Pig sample
Sample description
nTPM
Pons nTPM: 190.6
Samples: 4
Max nTPM: 235.4
Min nTPM: 135.1
Sample A
Female
158.6
Sample B
Female
135.1
Sample C
Male
233.2
Sample D
Male
235.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
