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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
52.4
nTPM
HPA Brain:
77.6
nTPM
GTEx:
52.4
nTPM
FANTOM5:
99.7
Scaled Tags Per Million
Pig:
32.3
nTPM
Mouse:
27.3
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
77.6
Sample id
Sample description
nTPM
Amygdala nTPM: 77.6
2814
Male, age 76, right hemisphere
98.1
2695
Female, age 67, right hemisphere
88.0
2514
Male, age 75, right hemisphere
87.9
2517
Female, age 94, left hemisphere
61.3
1987
Female, age 91, left hemisphere
52.7
Basal amygdala nTPM: 52.4
2827
Female, age 67, right hemisphere
61.2
2685
Female, age 94, left hemisphere
59.8
2609
Male, age 75, right hemisphere
54.5
2110
Male, age 80, left hemisphere
53.2
1955
Male, age 76, both hemispheres
51.7
2243
Female, age 91, right hemisphere
34.2
Central amygdala nTPM: 66.5
2826
Female, age 94, left hemisphere
109.1
1905
Male, age 76, both hemispheres
72.7
2515
Male, age 75, right hemisphere
57.7
2701
Female, age 91, right hemisphere
46.9
2239
Male, age 80, left hemisphere
46.2
Corticomedial amygdala nTPM: 44.7
2428
Male, age 75, right hemisphere
55.4
2240
Male, age 76, both hemispheres
50.9
2429
Female, age 94, left hemisphere
48.1
2535
Female, age 67, right hemisphere
41.5
2829
Male, age 80, left hemisphere
37.2
2242
Female, age 91, right hemisphere
34.9
Lateral amygdala nTPM: 66.6
2534
Female, age 94, left hemisphere
85.3
2516
Male, age 75, right hemisphere
79.6
2830
Female, age 67, right hemisphere
79.5
1883
Male, age 76, both hemispheres
71.3
2256
Male, age 80, left hemisphere
48.6
2255
Female, age 91, right hemisphere
35.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
52.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 52.4
Samples: 152
Max nTPM: 127.2
Min nTPM: 18.7
Std nTPM: 21.2
Median nTPM: 45.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
127.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
126.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
112.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
110.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
110.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
103.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
102.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
102.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
100.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
100.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
98.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
90.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
83.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
83.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
78.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
77.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
77.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
76.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
76.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
75.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
75.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
72.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
72.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
72.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
72.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
70.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
70.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
68.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
67.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
66.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
65.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
64.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
63.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
63.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
62.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
62.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
62.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
60.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
60.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
59.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
58.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
58.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
58.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
57.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
56.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
56.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
56.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
56.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
55.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
55.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
55.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
54.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
54.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
54.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
53.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
53.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
53.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
52.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
52.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
51.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
51.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
50.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
50.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
50.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
49.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
49.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
49.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
49.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
48.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
48.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
48.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
48.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
46.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
46.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
45.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
45.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
45.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
45.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
45.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
44.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
44.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
44.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
44.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
43.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
43.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
43.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
42.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
42.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
42.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
42.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
41.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
41.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
41.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
41.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
41.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
41.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
41.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
41.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
40.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
40.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
40.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
40.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
40.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
40.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
40.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
39.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
39.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
39.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
39.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
38.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
38.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
38.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
38.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
38.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
37.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
37.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
37.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
37.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
37.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
37.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
36.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
36.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
36.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
35.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
35.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
34.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
34.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
33.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
32.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
32.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
31.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
30.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
30.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
30.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
30.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
30.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
29.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
29.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
28.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
26.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
25.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
24.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
22.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
19.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
18.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
27.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 27.3
Samples: 4
Max nTPM: 27.9
Min nTPM: 26.7
Sample A
Male
26.7
Sample B
Male
27.4
Sample C
Female
27.9
Sample D
Female
27.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
