HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:63.0 nTPM
HPA Brain:72.2 nTPM
GTEx:63.0 nTPM
FANTOM5:127.1 Scaled Tags Per Million
Pig:44.5 nTPM
Mouse:31.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045599
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.2
Sample id Sample description nTPM
Hippocampus
nTPM: 56.3
2529 Female, age 94, left hemisphere 70.4
1911 Female, age 85, right hemisphere 58.6
1898 Male, age 80, left hemisphere 57.6
1855 Male, age 76, left hemisphere 52.8
2621 Female, age 67, right hemisphere 51.4
2148 Female, age 91, left hemisphere 47.3
Dentate gyrus
nTPM: 51.9
2530 Female, age 94, left hemisphere 74.8
2010 Male, age 76, both hemispheres 65.9
2528 Male, age 74, both hemispheres 44.8
1927 Female, age 91, both hemispheres 44.3
2246 Female, age 85, both hemispheres 43.5
2531 Female, age 67, both hemispheres 38.3
Entorhinal gyrus
nTPM: 52.9
2117 Female, age 91, right hemisphere 87.6
2686 Male, age 75, right hemisphere 52.1
2764 Male, age 80, right hemisphere 51.5
1938 Female, age 85, left hemisphere 48.1
2613 Female, age 94, left hemisphere 39.8
1787 Male, age 76, left hemisphere 38.2
Hippocampus, CA1
nTPM: 48.7
2527 Male, age 74, both hemispheres 61.2
1873 Female, age 85, both hemispheres 53.1
2082 Female, age 91, right hemisphere 45.9
2045 Male, age 76, both hemispheres 42.3
2749 Male, age 80, left hemisphere 40.8
Hippocampus, CA2
nTPM: 56.6
2437 Female, age 94, left hemisphere 63.6
2249 Male, age 74, both hemispheres 62.1
1963 Male, age 80, left hemisphere 60.6
2113 Female, age 91, right hemisphere 54.0
1940 Female, age 85, left hemisphere 52.0
1892 Male, age 76, both hemispheres 47.3
Hippocampus, CA3
nTPM: 43.9
1891 Female, age 85, both hemispheres 78.4
1867 Male, age 76, both hemispheres 54.9
2436 Male, age 74, both hemispheres 50.0
2137 Male, age 80, left hemisphere 33.3
2861 Female, age 67, both hemispheres 25.5
2620 Female, age 94, left hemisphere 21.2
Parahippocampal cortex
nTPM: 49.2
1990 Female, age 91, right hemisphere 62.1
1850 Male, age 80, both hemispheres 61.0
2692 Male, age 74, both hemispheres 59.5
2018 Male, age 76, both hemispheres 57.7
2532 Female, age 72, left hemisphere 51.1
1933 Female, age 85, both hemispheres 48.7
2245 Female, age 91, both hemispheres 48.1
2693 Female, age 94, both hemispheres 38.6
2250 Female, age 67, right hemisphere 36.9
2622 Female, age 67, right hemisphere 27.9
Perirhinal gyrus
nTPM: 41.1
2521 Female, age 94, right hemisphere 42.3
1847 Female, age 91, left hemisphere 41.8
2848 Male, age 76, right hemisphere 41.6
1841 Female, age 85, right hemisphere 40.8
1794 Male, age 80, right hemisphere 39.1
Subiculum
nTPM: 72.2
2042 Male, age 76, both hemispheres 98.8
2438 Female, age 94, left hemisphere 90.2
1901 Male, age 80, both hemispheres 80.0
1977 Female, age 85, both hemispheres 66.3
2619 Male, age 74, both hemispheres 52.4
2729 Female, age 91, right hemisphere 45.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.0
Samples: 197

Max nTPM: 151.4
Min nTPM: 19.3
Std nTPM: 28.1
Median nTPM: 56.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 151.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 149.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 134.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 133.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 131.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 131.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 130.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 130.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 128.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 123.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 114.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.1
FF:10153-102I9 76 years, female 127.5
FF:10169-103B7 60 years, female 126.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 44.5
Pig sample Sample description nTPM
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 46.6
Min nTPM: 31.0
Sample A Female 46.6
Sample B Female 35.1
Sample C Male 31.4
Sample D Male 31.0
Dorsal hippocampus
nTPM: 44.5
Samples: 4

Max nTPM: 55.0
Min nTPM: 29.3
Sample A Female 54.5
Sample B Female 39.1
Sample C Male 55.0
Sample D Male 29.3
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 47.0
Min nTPM: 32.2
Sample A Female 35.0
Sample B Female 47.0
Sample C Male 34.5
Sample D Male 32.2
Ventral hippocampus
nTPM: 34.0
Samples: 4

Max nTPM: 36.0
Min nTPM: 28.6
Sample A Female 36.0
Sample B Female 28.6
Sample C Male 35.9
Sample D Male 35.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 31.7
Min nTPM: 24.6
Sample A Male 30.0
Sample B Male 31.7
Sample C Female 28.1
Sample D Female 24.6
Hippocampal formation
nTPM: 31.3
Samples: 4

Max nTPM: 32.5
Min nTPM: 29.3
Sample A Male 31.8
Sample B Male 31.5
Sample C Female 32.5
Sample D Female 29.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74357607 Antisense, RP_060119_03_A09, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org