We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
33.6
nTPM
Monaco:
99.0
nTPM
Schmiedel:
33.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
33.6
HPA sample
nTPM
gdT-cell nTPM: 27.8
Samples: 6
Max nTPM: 36.7
Min nTPM: 22.9
P10809_1007
24.5
P10809_1022
32.6
P10809_1041
36.7
P10809_1060
27.0
P10809_1077
22.9
P10809_1098
23.2
MAIT T-cell nTPM: 24.1
Samples: 6
Max nTPM: 28.9
Min nTPM: 17.5
P10809_1006
17.5
P10809_1024
28.0
P10809_1043
27.0
P10809_1062
20.7
P10809_1083
28.9
P10809_1097
22.5
Memory CD4 T-cell nTPM: 25.0
Samples: 6
Max nTPM: 28.2
Min nTPM: 21.9
P10809_1014
23.2
P10809_1026
21.9
P10809_1045
28.2
P10809_1064
26.9
P10809_1086
23.4
P10809_1113
26.2
Memory CD8 T-cell nTPM: 24.0
Samples: 5
Max nTPM: 30.9
Min nTPM: 15.4
P10809_1012
20.5
P10809_1027
30.9
P10809_1046
27.6
P10809_1065
25.6
P10809_1111
15.4
Naive CD4 T-cell nTPM: 26.5
Samples: 6
Max nTPM: 32.6
Min nTPM: 18.4
P10809_1015
25.3
P10809_1030
32.6
P10809_1049
32.5
P10809_1068
18.4
P10809_1085
26.5
P10809_1112
23.7
Naive CD8 T-cell nTPM: 33.1
Samples: 6
Max nTPM: 43.8
Min nTPM: 27.0
P10809_1016
27.0
P10809_1031
43.8
P10809_1050
36.2
P10809_1069
35.2
P10809_1087
28.5
P10809_1110
27.6
T-reg nTPM: 33.6
Samples: 6
Max nTPM: 46.8
Min nTPM: 24.4
P10809_1018
29.5
P10809_1037
37.9
P10809_1056
46.8
P10809_1075
34.5
P10809_1094
24.4
P10809_1106
28.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 81.5
Samples: 4
Max nTPM: 100.2
Min nTPM: 54.4
RHH5202_R3573
100.2
RHH5230_R3602
75.2
RHH5259_R3631
54.4
RHH5288_R3660
96.2
Effector memory CD8 T-cell nTPM: 98.9
Samples: 4
Max nTPM: 125.3
Min nTPM: 73.9
RHH5203_R3574
100.3
RHH5231_R3603
73.9
RHH5260_R3632
96.2
RHH5289_R3661
125.3
MAIT T-cell nTPM: 86.6
Samples: 4
Max nTPM: 100.2
Min nTPM: 71.0
RHH5233_R3605
83.3
RHH5205_R3576
100.2
RHH5262_R3634
91.9
RHH5297_R3663
71.0
Memory CD4 T-cell TFH nTPM: 87.3
Samples: 4
Max nTPM: 96.6
Min nTPM: 65.4
RHH5300_R3666
65.4
RHH5236_R3608
91.7
RHH5265_R3637
95.3
RHH5208_R3579
96.6
Memory CD4 T-cell Th1 nTPM: 76.4
Samples: 4
Max nTPM: 88.7
Min nTPM: 66.0
RHH5210_R3581
88.7
RHH5302_R3668
76.1
RHH5238_R3610
74.6
RHH5267_R3639
66.0
Memory CD4 T-cell Th1/Th17 nTPM: 76.5
Samples: 4
Max nTPM: 93.2
Min nTPM: 59.5
RHH5303_R3669
77.3
RHH5211_R3582
93.2
RHH5239_R3611
59.5
RHH5268_R3640
76.0
Memory CD4 T-cell Th17 nTPM: 73.9
Samples: 4
Max nTPM: 79.3
Min nTPM: 67.0
RHH5304_R3670
79.3
RHH5212_R3583
75.6
RHH5240_R3612
73.7
RHH5269_R3641
67.0
Memory CD4 T-cell Th2 nTPM: 79.0
Samples: 4
Max nTPM: 85.8
Min nTPM: 60.2
RHH5305_R3671
84.5
RHH5213_R3584
85.3
RHH5241_R3613
60.2
RHH5270_R3642
85.8
Naive CD4 T-cell nTPM: 87.8
Samples: 4
Max nTPM: 105.8
Min nTPM: 69.9
RHH5306_R3672
69.9
RHH5214_R3585
89.8
RHH5242_R3614
105.8
RHH5271_R3643
85.6
Naive CD8 T-cell nTPM: 82.9
Samples: 4
Max nTPM: 106.1
Min nTPM: 54.6
RHH5201_R3572
106.1
RHH5229_R3601
54.6
RHH5258_R3630
88.9
RHH5287_R3659
81.9
Non-Vd2 gdTCR nTPM: 92.7
Samples: 4
Max nTPM: 107.9
Min nTPM: 72.8
RHH5235_R3607
101.5
RHH5264_R3636
88.4
RHH5207_R3578
107.9
RHH5299_R3665
72.8
T-reg nTPM: 89.1
Samples: 4
Max nTPM: 107.7
Min nTPM: 76.1
RHH5301_R3667
76.1
RHH5237_R3609
85.4
RHH5266_R3638
87.0
RHH5209_R3580
107.7
Terminal effector memory CD4 T-cell nTPM: 91.1
Samples: 2
Max nTPM: 91.8
Min nTPM: 90.4
RHH5243_R3615
90.4
RHH5272_R3644
91.8
Terminal effector memory CD8 T-cell nTPM: 78.4
Samples: 4
Max nTPM: 85.7
Min nTPM: 70.0
RHH5232_R3604
85.2
RHH5204_R3575
85.7
RHH5261_R3633
72.5
RHH5296_R3662
70.0
Vd2 gdTCR nTPM: 95.2
Samples: 4
Max nTPM: 108.2
Min nTPM: 86.4
RHH5234_R3606
108.2
RHH5206_R3577
93.5
RHH5263_R3635
92.8
RHH5298_R3664
86.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
