HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:482.8 nTPM
HPA Brain:718.0 nTPM
GTEx:482.8 nTPM
FANTOM5:347.0 Scaled Tags Per Million
Pig:321.5 nTPM
Mouse:568.3 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044316
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 718.0
Sample id Sample description nTPM
Hippocampus
nTPM: 718.0
2621 Female, age 67, right hemisphere 912.6
2148 Female, age 91, left hemisphere 780.6
1911 Female, age 85, right hemisphere 779.4
1855 Male, age 76, left hemisphere 675.4
2529 Female, age 94, left hemisphere 633.5
1898 Male, age 80, left hemisphere 526.8
Dentate gyrus
nTPM: 636.4
1927 Female, age 91, both hemispheres 930.1
2531 Female, age 67, both hemispheres 700.1
2530 Female, age 94, left hemisphere 683.6
2010 Male, age 76, both hemispheres 650.5
2528 Male, age 74, both hemispheres 476.3
2246 Female, age 85, both hemispheres 377.6
Entorhinal gyrus
nTPM: 346.2
2613 Female, age 94, left hemisphere 507.0
1938 Female, age 85, left hemisphere 335.8
2117 Female, age 91, right hemisphere 316.3
1787 Male, age 76, left hemisphere 315.0
2686 Male, age 75, right hemisphere 305.0
2764 Male, age 80, right hemisphere 298.0
Hippocampus, CA1
nTPM: 624.4
2749 Male, age 80, left hemisphere 971.2
2527 Male, age 74, both hemispheres 642.9
1873 Female, age 85, both hemispheres 614.9
2045 Male, age 76, both hemispheres 553.6
2082 Female, age 91, right hemisphere 339.2
Hippocampus, CA2
nTPM: 587.5
1963 Male, age 80, left hemisphere 1291.9
1892 Male, age 76, both hemispheres 630.2
2437 Female, age 94, left hemisphere 462.8
2113 Female, age 91, right hemisphere 444.9
2249 Male, age 74, both hemispheres 440.8
1940 Female, age 85, left hemisphere 254.3
Hippocampus, CA3
nTPM: 695.8
2137 Male, age 80, left hemisphere 1104.9
2861 Female, age 67, both hemispheres 907.4
2620 Female, age 94, left hemisphere 680.5
1867 Male, age 76, both hemispheres 658.3
2436 Male, age 74, both hemispheres 427.5
1891 Female, age 85, both hemispheres 396.5
Parahippocampal cortex
nTPM: 344.3
2245 Female, age 91, both hemispheres 712.1
2018 Male, age 76, both hemispheres 468.9
2250 Female, age 67, right hemisphere 376.1
2622 Female, age 67, right hemisphere 316.5
1933 Female, age 85, both hemispheres 307.4
2692 Male, age 74, both hemispheres 281.8
2693 Female, age 94, both hemispheres 275.3
1990 Female, age 91, right hemisphere 270.2
1850 Male, age 80, both hemispheres 223.7
2532 Female, age 72, left hemisphere 211.4
Perirhinal gyrus
nTPM: 282.7
2521 Female, age 94, right hemisphere 372.8
1847 Female, age 91, left hemisphere 356.2
1794 Male, age 80, right hemisphere 235.3
2848 Male, age 76, right hemisphere 234.9
1841 Female, age 85, right hemisphere 214.6
Subiculum
nTPM: 383.8
2042 Male, age 76, both hemispheres 569.9
1901 Male, age 80, both hemispheres 470.3
2729 Female, age 91, right hemisphere 446.5
2619 Male, age 74, both hemispheres 306.8
1977 Female, age 85, both hemispheres 274.2
2438 Female, age 94, left hemisphere 235.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 482.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 482.8
Samples: 197

Max nTPM: 1657.7
Min nTPM: 43.2
Std nTPM: 334.9
Median nTPM: 392.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1657.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1631.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1540.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1388.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1273.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1246.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1246.1
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 1221.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1220.7
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1184.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1174.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 347.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 347.0
FF:10153-102I9 76 years, female 395.9
FF:10169-103B7 60 years, female 298.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 321.5
Pig sample Sample description nTPM
Subiculum
nTPM: 178.0
Samples: 4

Max nTPM: 237.9
Min nTPM: 135.6
Sample A Female 237.9
Sample B Female 160.9
Sample C Male 177.6
Sample D Male 135.6
Dorsal hippocampus
nTPM: 319.2
Samples: 4

Max nTPM: 412.6
Min nTPM: 258.5
Sample A Female 412.6
Sample B Female 329.7
Sample C Male 258.5
Sample D Male 275.9
Entorhinal cortex
nTPM: 192.0
Samples: 4

Max nTPM: 251.7
Min nTPM: 156.3
Sample A Female 189.3
Sample B Female 170.8
Sample C Male 251.7
Sample D Male 156.3
Ventral hippocampus
nTPM: 321.5
Samples: 4

Max nTPM: 390.9
Min nTPM: 222.0
Sample A Female 300.4
Sample B Female 222.0
Sample C Male 390.9
Sample D Male 372.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 568.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 391.2
Samples: 4

Max nTPM: 454.3
Min nTPM: 350.8
Sample A Male 380.9
Sample B Male 350.8
Sample C Female 454.3
Sample D Female 378.7
Hippocampal formation
nTPM: 568.3
Samples: 4

Max nTPM: 589.4
Min nTPM: 533.1
Sample A Male 576.4
Sample B Male 574.3
Sample C Female 589.4
Sample D Female 533.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
74821712 Antisense, RP_060321_02_C05, Mouse strain C57BL/6J (56 days, male) 14.8

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