HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:15.0 nTPM
HPA Brain:33.7 nTPM
GTEx:15.0 nTPM
FANTOM5:16.6 Scaled Tags Per Million
Pig:9.2 nTPM
Mouse:5.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001935Antibody HPA003911
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 23.9
1911 Female, age 85, right hemisphere 30.4
2529 Female, age 94, left hemisphere 29.8
2621 Female, age 67, right hemisphere 24.7
2148 Female, age 91, left hemisphere 22.8
1855 Male, age 76, left hemisphere 19.2
1898 Male, age 80, left hemisphere 16.8
Dentate gyrus
nTPM: 23.1
2530 Female, age 94, left hemisphere 29.1
2010 Male, age 76, both hemispheres 27.9
2528 Male, age 74, both hemispheres 23.4
2246 Female, age 85, both hemispheres 23.2
2531 Female, age 67, both hemispheres 17.5
1927 Female, age 91, both hemispheres 17.4
Entorhinal gyrus
nTPM: 28.9
2117 Female, age 91, right hemisphere 40.2
2686 Male, age 75, right hemisphere 32.1
2613 Female, age 94, left hemisphere 31.5
2764 Male, age 80, right hemisphere 29.8
1787 Male, age 76, left hemisphere 20.3
1938 Female, age 85, left hemisphere 19.5
Hippocampus, CA1
nTPM: 20.9
2082 Female, age 91, right hemisphere 29.0
2527 Male, age 74, both hemispheres 23.6
1873 Female, age 85, both hemispheres 20.1
2749 Male, age 80, left hemisphere 17.2
2045 Male, age 76, both hemispheres 14.8
Hippocampus, CA2
nTPM: 25.3
1963 Male, age 80, left hemisphere 28.6
1940 Female, age 85, left hemisphere 28.4
2437 Female, age 94, left hemisphere 27.2
2113 Female, age 91, right hemisphere 25.9
2249 Male, age 74, both hemispheres 25.6
1892 Male, age 76, both hemispheres 15.9
Hippocampus, CA3
nTPM: 23.3
2436 Male, age 74, both hemispheres 38.9
1891 Female, age 85, both hemispheres 32.5
1867 Male, age 76, both hemispheres 23.9
2137 Male, age 80, left hemisphere 15.3
2620 Female, age 94, left hemisphere 14.7
2861 Female, age 67, both hemispheres 14.7
Parahippocampal cortex
nTPM: 23.3
2692 Male, age 74, both hemispheres 31.2
1990 Female, age 91, right hemisphere 30.9
2018 Male, age 76, both hemispheres 29.5
2532 Female, age 72, left hemisphere 25.2
2622 Female, age 67, right hemisphere 21.8
1933 Female, age 85, both hemispheres 20.3
2245 Female, age 91, both hemispheres 20.1
2693 Female, age 94, both hemispheres 19.0
1850 Male, age 80, both hemispheres 18.6
2250 Female, age 67, right hemisphere 16.9
Perirhinal gyrus
nTPM: 15.9
2521 Female, age 94, right hemisphere 17.4
1847 Female, age 91, left hemisphere 16.1
2848 Male, age 76, right hemisphere 16.1
1794 Male, age 80, right hemisphere 15.1
1841 Female, age 85, right hemisphere 14.5
Subiculum
nTPM: 33.7
2042 Male, age 76, both hemispheres 44.2
1901 Male, age 80, both hemispheres 37.4
2438 Female, age 94, left hemisphere 36.3
2729 Female, age 91, right hemisphere 29.6
2619 Male, age 74, both hemispheres 28.9
1977 Female, age 85, both hemispheres 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 56.7
Min nTPM: 3.2
Std nTPM: 7.3
Median nTPM: 13.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 56.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 42.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 37.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 33.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 31.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 30.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 27.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 27.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 27.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.6
FF:10153-102I9 76 years, female 22.9
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.2
Pig sample Sample description nTPM
Subiculum
nTPM: 6.2
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 6.5
Sample C Male 6.4
Sample D Male 6.0
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 10.4
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 8.4
Sample C Male 7.3
Sample D Male 10.4
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.6
Min nTPM: 7.3
Sample A Female 10.0
Sample B Female 8.7
Sample C Male 7.3
Sample D Male 10.6
Ventral hippocampus
nTPM: 7.5
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.3
Sample A Female 6.3
Sample B Female 8.4
Sample C Male 6.8
Sample D Male 8.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Male 4.2
Sample B Male 3.5
Sample C Female 3.8
Sample D Female 2.6
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 7.2
Min nTPM: 3.4
Sample A Male 3.4
Sample B Male 4.6
Sample C Female 6.2
Sample D Female 7.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69817193 Antisense, RP_050510_02_G11, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org