HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:401.7 nTPM
HPA Brain:290.0 nTPM
GTEx:401.7 nTPM
FANTOM5:424.3 Scaled Tags Per Million
Pig:245.8 nTPM
Mouse:626.5 nTPM
Allen mouse:10.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047224Antibody HPA058546Antibody CAB008630
Glial cells Not detectedNot detectedLow
Neuronal cells Not detectedNot detectedLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 290.0
Sample id Sample description nTPM
Hippocampus
nTPM: 265.4
1898 Male, age 80, left hemisphere 319.5
2621 Female, age 67, right hemisphere 301.1
2529 Female, age 94, left hemisphere 266.6
1855 Male, age 76, left hemisphere 251.7
2148 Female, age 91, left hemisphere 236.6
1911 Female, age 85, right hemisphere 216.8
Dentate gyrus
nTPM: 253.9
2530 Female, age 94, left hemisphere 280.5
2010 Male, age 76, both hemispheres 278.7
2246 Female, age 85, both hemispheres 268.2
1927 Female, age 91, both hemispheres 260.1
2528 Male, age 74, both hemispheres 219.5
2531 Female, age 67, both hemispheres 216.3
Entorhinal gyrus
nTPM: 249.0
2764 Male, age 80, right hemisphere 289.4
1787 Male, age 76, left hemisphere 267.8
1938 Female, age 85, left hemisphere 261.8
2117 Female, age 91, right hemisphere 243.2
2613 Female, age 94, left hemisphere 241.2
2686 Male, age 75, right hemisphere 190.7
Hippocampus, CA1
nTPM: 276.0
2749 Male, age 80, left hemisphere 407.2
2527 Male, age 74, both hemispheres 280.3
2082 Female, age 91, right hemisphere 231.7
1873 Female, age 85, both hemispheres 231.6
2045 Male, age 76, both hemispheres 229.4
Hippocampus, CA2
nTPM: 263.4
1892 Male, age 76, both hemispheres 281.7
2437 Female, age 94, left hemisphere 279.6
1963 Male, age 80, left hemisphere 267.5
2249 Male, age 74, both hemispheres 267.1
1940 Female, age 85, left hemisphere 259.3
2113 Female, age 91, right hemisphere 224.9
Hippocampus, CA3
nTPM: 269.4
2436 Male, age 74, both hemispheres 355.7
2137 Male, age 80, left hemisphere 318.3
1867 Male, age 76, both hemispheres 255.7
2861 Female, age 67, both hemispheres 243.0
2620 Female, age 94, left hemisphere 227.3
1891 Female, age 85, both hemispheres 216.4
Parahippocampal cortex
nTPM: 252.7
1850 Male, age 80, both hemispheres 282.9
2245 Female, age 91, both hemispheres 279.0
2250 Female, age 67, right hemisphere 265.0
2622 Female, age 67, right hemisphere 260.1
2532 Female, age 72, left hemisphere 254.3
1933 Female, age 85, both hemispheres 247.6
1990 Female, age 91, right hemisphere 246.7
2692 Male, age 74, both hemispheres 245.1
2018 Male, age 76, both hemispheres 231.1
2693 Female, age 94, both hemispheres 215.4
Perirhinal gyrus
nTPM: 290.0
1794 Male, age 80, right hemisphere 350.4
1847 Female, age 91, left hemisphere 320.2
2521 Female, age 94, right hemisphere 278.2
1841 Female, age 85, right hemisphere 267.5
2848 Male, age 76, right hemisphere 233.9
Subiculum
nTPM: 266.8
2438 Female, age 94, left hemisphere 326.9
2619 Male, age 74, both hemispheres 275.6
1901 Male, age 80, both hemispheres 271.5
1977 Female, age 85, both hemispheres 259.2
2042 Male, age 76, both hemispheres 251.3
2729 Female, age 91, right hemisphere 216.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 401.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 401.7
Samples: 197

Max nTPM: 918.9
Min nTPM: 138.4
Std nTPM: 116.1
Median nTPM: 388.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 918.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 876.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 770.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 730.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 726.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 717.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 683.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 666.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 656.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 631.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 630.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 424.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 424.3
FF:10169-103B7 60 years, female 465.2
FF:10153-102I9 76 years, female 383.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 245.8
Pig sample Sample description nTPM
Subiculum
nTPM: 241.0
Samples: 4

Max nTPM: 338.5
Min nTPM: 199.5
Sample A Female 338.5
Sample B Female 220.1
Sample C Male 199.5
Sample D Male 205.7
Dorsal hippocampus
nTPM: 245.8
Samples: 4

Max nTPM: 347.0
Min nTPM: 166.7
Sample A Female 347.0
Sample B Female 215.2
Sample C Male 254.4
Sample D Male 166.7
Entorhinal cortex
nTPM: 232.6
Samples: 4

Max nTPM: 260.8
Min nTPM: 191.3
Sample A Female 247.6
Sample B Female 260.8
Sample C Male 230.6
Sample D Male 191.3
Ventral hippocampus
nTPM: 232.9
Samples: 4

Max nTPM: 283.2
Min nTPM: 145.0
Sample A Female 268.7
Sample B Female 145.0
Sample C Male 283.2
Sample D Male 234.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 626.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 626.5
Samples: 4

Max nTPM: 659.4
Min nTPM: 570.1
Sample A Male 625.3
Sample B Male 651.2
Sample C Female 659.4
Sample D Female 570.1
Hippocampal formation
nTPM: 619.2
Samples: 4

Max nTPM: 705.3
Min nTPM: 524.6
Sample A Male 705.3
Sample B Male 524.6
Sample C Female 591.2
Sample D Female 655.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.0
69734572 Antisense, RP_050503_01_B10, Mouse strain C57BL/6J (56 days, male) 10.0

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