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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
374.2
nTPM
FANTOM5:
487.1
Scaled Tags Per Million
Pig:
401.5
nTPM
Allen mouse:
11.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
374.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 244.7
2301
Female, age 85, both hemispheres
278.7
2090
Male, age 80, both hemispheres
240.2
2188
Female, age 91, both hemispheres
233.9
1984
Male, age 76, both hemispheres
225.9
Dorsal cochlear nucleus nTPM: 259.2
2802
Male, age 74, right hemisphere
290.1
2187
Female, age 91, both hemispheres
282.5
2058
Male, age 76, both hemispheres
252.7
2370
Male, age 61, both hemispheres
249.9
2378
Male, age 80, both hemispheres
220.8
Dorsal tegmental nucleus nTPM: 305.6
2358
Male, age 61, both hemispheres
403.2
2083
Male, age 80, both hemispheres
299.0
1936
Male, age 76, left hemisphere
261.2
2326
Male, age 74, both hemispheres
258.8
Dorsolateral tegmental area nTPM: 296.3
2337
Male, age 61, both hemispheres
329.0
2654
Male, age 80, both hemispheres
304.8
2751
Female, age 85, both hemispheres
302.0
2141
Male, age 76, both hemispheres
287.7
2360
Male, age 74, both hemispheres
258.1
Kolliker-Fuse nucleus nTPM: 299.1
2163
Male, age 80, both hemispheres
330.7
2315
Male, age 76, right hemisphere
303.2
2793
Female, age 91, left hemisphere
263.2
Lateral lemniscal nuclei nTPM: 253.1
2169
Male, age 76, both hemispheres
315.5
2746
Female, age 85, left hemisphere
267.2
2036
Male, age 80, both hemispheres
250.0
2453
Male, age 74, right hemisphere
235.2
2320
Female, age 91, left hemisphere
197.4
Lateral parabrachial nucleus nTPM: 268.5
2139
Female, age 85, right hemisphere
295.9
2013
Male, age 80, both hemispheres
283.0
2792
Male, age 76, both hemispheres
257.8
2790
Male, age 61, both hemispheres
237.3
Lateral vestibular nucleus nTPM: 310.7
2184
Male, age 76, both hemispheres
313.1
2311
Male, age 80, both hemispheres
308.3
Locus coeruleus nTPM: 374.2
2720
Male, age 74, both hemispheres
436.8
2014
Male, age 55, unknown
433.5
2123
Female, age 91, both hemispheres
421.8
1980
Male, age 76, both hemispheres
352.4
2162
Male, age 80, both hemispheres
340.4
2317
Female, age 72, unknown
339.9
2788
Male, age 74, unknown
294.3
Medial parabrachial nucleus nTPM: 296.8
2170
Female, age 91, both hemispheres
359.6
2854
Male, age 80, both hemispheres
324.8
2786
Male, age 76, both hemispheres
271.3
2156
Male, age 61, both hemispheres
269.1
2463
Female, age 85, right hemisphere
259.1
Medial periolivary nuclei nTPM: 246.4
2171
Female, age 85, both hemispheres
303.0
2063
Male, age 76, both hemispheres
278.9
2791
Male, age 74, right hemisphere
250.5
2458
Female, age 91, both hemispheres
203.9
2081
Male, age 80, both hemispheres
195.4
Motor facial nucleus nTPM: 253.4
2062
Male, age 76, both hemispheres
301.4
2697
Female, age 85, both hemispheres
279.8
2365
Male, age 74, right hemisphere
279.7
2795
Female, age 91, both hemispheres
250.6
2126
Male, age 61, both hemispheres
207.2
2327
Male, age 80, both hemispheres
202.0
Motor trigeminal nucleus nTPM: 245.2
2335
Male, age 61, both hemispheres
284.9
2309
Male, age 76, both hemispheres
259.7
2560
Male, age 74, both hemispheres
247.7
2079
Male, age 80, both hemispheres
229.4
2321
Female, age 91, both hemispheres
204.2
Nuclei of the trapezoid body nTPM: 258.8
1983
Male, age 76, both hemispheres
316.1
2159
Male, age 61, both hemispheres
291.0
2735
Female, age 85, both hemispheres
264.0
2166
Male, age 80, both hemispheres
235.5
2368
Female, age 91, both hemispheres
187.4
Nucleus raphe magnus nTPM: 264.8
2160
Male, age 61, both hemispheres
318.1
2172
Female, age 85, both hemispheres
293.7
2051
Male, age 76, both hemispheres
286.5
2455
Male, age 74, both hemispheres
276.8
2328
Male, age 80, both hemispheres
234.0
2459
Female, age 91, both hemispheres
179.7
Paramedian reticular nucleus nTPM: 282.5
2050
Female, age 85, both hemispheres
325.9
2313
Male, age 61, both hemispheres
299.7
2057
Male, age 80, both hemispheres
270.5
2052
Male, age 76, both hemispheres
233.8
Pedunculopontine tegmental nucleus nTPM: 296.6
2334
Male, age 80, both hemispheres
329.1
1921
Female, age 85, both hemispheres
295.8
2338
Male, age 61, both hemispheres
264.8
Pontine nuclei nTPM: 262.1
2787
Female, age 85, both hemispheres
346.6
1863
Male, age 55, unknown
318.6
1968
Male, age 76, left hemisphere
276.8
2109
Female, age 72, unknown
257.4
2727
Male, age 61, right hemisphere
240.3
2319
Female, age 91, both hemispheres
223.5
2454
Male, age 74, left hemisphere
217.6
2115
Male, age 80, left hemisphere
215.9
Pontine raphe nucleus nTPM: 307.9
2853
Male, age 76, midline
328.1
2122
Female, age 85, midline
287.7
Posteroventral cochlear nucleus nTPM: 246.6
2752
Female, age 85, both hemispheres
291.5
2070
Male, age 76, both hemispheres
273.5
2371
Male, age 61, both hemispheres
250.1
2341
Male, age 80, both hemispheres
223.3
2135
Female, age 91, both hemispheres
194.5
Principal sensory trigeminal nucleus nTPM: 260.0
2324
Male, age 76, both hemispheres
311.8
2158
Male, age 61, both hemispheres
289.0
2008
Male, age 80, left hemisphere
228.8
2367
Female, age 91, left hemisphere
210.4
Reticular pontine nucleus, caudal nTPM: 238.3
2092
Male, age 76, both hemispheres
278.3
2559
Male, age 74, both hemispheres
245.6
2332
Male, age 80, right hemisphere
230.4
2457
Female, age 91, both hemispheres
199.0
Reticular pontine nucleus, oral nTPM: 267.1
2167
Male, age 76, both hemispheres
327.0
1939
Male, age 80, both hemispheres
322.1
2012
Female, age 85, both hemispheres
274.5
2366
Female, age 91, both hemispheres
206.9
2361
Male, age 74, both hemispheres
205.2
Reticulotegmental nucleus nTPM: 266.9
2325
Male, age 76, both hemispheres
292.5
2333
Male, age 80, both hemispheres
266.7
2452
Male, age 74, both hemispheres
256.0
2322
Female, age 91, both hemispheres
252.5
Spinal trigeminal nucleus, oral nTPM: 268.7
2164
Male, age 80, both hemispheres
289.7
2737
Female, age 85, both hemispheres
263.1
1978
Male, age 76, both hemispheres
253.3
Subcoeruleus area nTPM: 278.4
2323
Female, age 91, left hemisphere
333.1
1958
Male, age 80, both hemispheres
293.3
2369
Female, age 85, left hemisphere
281.9
2451
Male, age 74, both hemispheres
262.3
2089
Male, age 76, left hemisphere
221.7
Superior olive nTPM: 245.9
2364
Male, age 74, right hemisphere
265.5
1875
Female, age 85, both hemispheres
262.7
2020
Male, age 76, both hemispheres
255.7
2329
Male, age 80, right hemisphere
226.2
2561
Female, age 91, both hemispheres
219.3
Ventral periolivary nuclei nTPM: 255.0
2130
Female, age 85, both hemispheres
299.2
2165
Male, age 80, both hemispheres
281.4
2023
Male, age 76, both hemispheres
241.7
2794
Female, age 91, left hemisphere
197.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 261.5
2840
Female, age 85, both hemispheres
329.8
2359
Male, age 61, both hemispheres
281.2
1959
Male, age 76, both hemispheres
264.9
2449
Male, age 74, both hemispheres
255.8
2161
Male, age 80, both hemispheres
243.4
2456
Female, age 91, both hemispheres
194.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
401.5
Pig sample
Sample description
nTPM
Pons nTPM: 401.6
Samples: 4
Max nTPM: 486.4
Min nTPM: 287.5
Sample A
Female
486.4
Sample B
Female
287.5
Sample C
Male
377.1
Sample D
Male
455.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
